Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd47Q61735 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cd47Q61735 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cd47Q61735 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cd47Q61735 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd47Q61735 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd47Q61735 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd47Q61735 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cd47Q61735 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cd47Q61735 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cd47Q61735 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cd47Q61735 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd47Q61735 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cd47Q61735 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cd47Q61735 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cd47Q61735 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cd47Q61735 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.99■□□□□ 0.95
Cd47Q61735 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cd47Q61735 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd47Q61735 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd47Q61735 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cd47Q61735 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cd47Q61735 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.97■□□□□ 0.95
Cd47Q61735 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cd47Q61735 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cd47Q61735 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cd47Q61735 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd47Q61735 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd47Q61735 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd47Q61735 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cd47Q61735 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cd47Q61735 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cd47Q61735 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cd47Q61735 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.94■□□□□ 0.94
Cd47Q61735 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.94■□□□□ 0.94
Cd47Q61735 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd47Q61735 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd47Q61735 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cd47Q61735 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd47Q61735 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd47Q61735 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cd47Q61735 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cd47Q61735 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Cd47Q61735 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd47Q61735 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cd47Q61735 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.91■□□□□ 0.94
Cd47Q61735 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd47Q61735 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd47Q61735 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.9■□□□□ 0.94
Cd47Q61735 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd47Q61735 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd47Q61735 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd47Q61735 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd47Q61735 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cd47Q61735 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.89■□□□□ 0.93
Cd47Q61735 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Cd47Q61735 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd47Q61735 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cd47Q61735 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd47Q61735 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cd47Q61735 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Cd47Q61735 Particl-201ENSMUST00000205370 1560 ntBASIC20.87■□□□□ 0.93
Cd47Q61735 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd47Q61735 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd47Q61735 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cd47Q61735 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cd47Q61735 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd47Q61735 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.86■□□□□ 0.93
Cd47Q61735 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cd47Q61735 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cd47Q61735 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cd47Q61735 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cd47Q61735 Nkain2-201ENSMUST00000092602 558 ntBASIC20.84■□□□□ 0.93
Cd47Q61735 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd47Q61735 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cd47Q61735 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cd47Q61735 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cd47Q61735 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd47Q61735 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd47Q61735 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cd47Q61735 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cd47Q61735 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.81■□□□□ 0.92
Cd47Q61735 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.81■□□□□ 0.92
Cd47Q61735 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cd47Q61735 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd47Q61735 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd47Q61735 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cd47Q61735 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cd47Q61735 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd47Q61735 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cd47Q61735 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cd47Q61735 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cd47Q61735 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cd47Q61735 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Cd47Q61735 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd47Q61735 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Cd47Q61735 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd47Q61735 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.79■□□□□ 0.92
Cd47Q61735 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd47Q61735 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms