Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.12■□□□□ 0.81
Vmn1r223Q5SSA0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r223Q5SSA0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r223Q5SSA0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r223Q5SSA0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r223Q5SSA0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r223Q5SSA0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r223Q5SSA0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r223Q5SSA0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r223Q5SSA0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.1■□□□□ 0.81
Vmn1r223Q5SSA0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Vmn1r223Q5SSA0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r223Q5SSA0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.1■□□□□ 0.81
Vmn1r223Q5SSA0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r223Q5SSA0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r223Q5SSA0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r223Q5SSA0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r223Q5SSA0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r223Q5SSA0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r223Q5SSA0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r223Q5SSA0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Vmn1r223Q5SSA0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r223Q5SSA0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Vmn1r223Q5SSA0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r223Q5SSA0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r223Q5SSA0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r223Q5SSA0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r223Q5SSA0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r223Q5SSA0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r223Q5SSA0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r223Q5SSA0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r223Q5SSA0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r223Q5SSA0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r223Q5SSA0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r223Q5SSA0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r223Q5SSA0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r223Q5SSA0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.03■□□□□ 0.8
Vmn1r223Q5SSA0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.03■□□□□ 0.8
Vmn1r223Q5SSA0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r223Q5SSA0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r223Q5SSA0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r223Q5SSA0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Vmn1r223Q5SSA0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r223Q5SSA0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r223Q5SSA0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r223Q5SSA0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Vmn1r223Q5SSA0 Gm30023-201ENSMUST00000197970 889 ntBASIC20.02■□□□□ 0.8
Vmn1r223Q5SSA0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r223Q5SSA0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r223Q5SSA0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r223Q5SSA0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vmn1r223Q5SSA0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Vmn1r223Q5SSA0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Vmn1r223Q5SSA0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r223Q5SSA0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r223Q5SSA0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20■□□□□ 0.79
Vmn1r223Q5SSA0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r223Q5SSA0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r223Q5SSA0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r223Q5SSA0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r223Q5SSA0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Vmn1r223Q5SSA0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r223Q5SSA0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r223Q5SSA0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r223Q5SSA0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vmn1r223Q5SSA0 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.97■□□□□ 0.79
Vmn1r223Q5SSA0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vmn1r223Q5SSA0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vmn1r223Q5SSA0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Vmn1r223Q5SSA0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vmn1r223Q5SSA0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Vmn1r223Q5SSA0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vmn1r223Q5SSA0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vmn1r223Q5SSA0 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.95■□□□□ 0.78
Vmn1r223Q5SSA0 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.95■□□□□ 0.78
Vmn1r223Q5SSA0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vmn1r223Q5SSA0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Vmn1r223Q5SSA0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vmn1r223Q5SSA0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vmn1r223Q5SSA0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vmn1r223Q5SSA0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vmn1r223Q5SSA0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Vmn1r223Q5SSA0 Particl-201ENSMUST00000205370 1560 ntBASIC19.92■□□□□ 0.78
Vmn1r223Q5SSA0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.92■□□□□ 0.78
Vmn1r223Q5SSA0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Vmn1r223Q5SSA0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vmn1r223Q5SSA0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vmn1r223Q5SSA0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vmn1r223Q5SSA0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Vmn1r223Q5SSA0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vmn1r223Q5SSA0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vmn1r223Q5SSA0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vmn1r223Q5SSA0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vmn1r223Q5SSA0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Vmn1r223Q5SSA0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vmn1r223Q5SSA0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vmn1r223Q5SSA0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vmn1r223Q5SSA0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Vmn1r223Q5SSA0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vmn1r223Q5SSA0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms