Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc106Q3ULM0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.2■□□□□ 0.98
Ccdc106Q3ULM0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc106Q3ULM0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc106Q3ULM0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc106Q3ULM0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc106Q3ULM0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccdc106Q3ULM0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.19■□□□□ 0.98
Ccdc106Q3ULM0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc106Q3ULM0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc106Q3ULM0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc106Q3ULM0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc106Q3ULM0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccdc106Q3ULM0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc106Q3ULM0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc106Q3ULM0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc106Q3ULM0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ccdc106Q3ULM0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccdc106Q3ULM0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc106Q3ULM0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc106Q3ULM0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccdc106Q3ULM0 Particl-201ENSMUST00000205370 1560 ntBASIC21.11■□□□□ 0.97
Ccdc106Q3ULM0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc106Q3ULM0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc106Q3ULM0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc106Q3ULM0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.1■□□□□ 0.97
Ccdc106Q3ULM0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ccdc106Q3ULM0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc106Q3ULM0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc106Q3ULM0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc106Q3ULM0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc106Q3ULM0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc106Q3ULM0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.09■□□□□ 0.97
Ccdc106Q3ULM0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc106Q3ULM0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc106Q3ULM0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc106Q3ULM0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc106Q3ULM0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc106Q3ULM0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc106Q3ULM0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc106Q3ULM0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc106Q3ULM0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc106Q3ULM0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc106Q3ULM0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc106Q3ULM0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc106Q3ULM0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc106Q3ULM0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc106Q3ULM0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ccdc106Q3ULM0 Gm6311-201ENSMUST00000073790 878 ntBASIC21.06■□□□□ 0.96
Ccdc106Q3ULM0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc106Q3ULM0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc106Q3ULM0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc106Q3ULM0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc106Q3ULM0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc106Q3ULM0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc106Q3ULM0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc106Q3ULM0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc106Q3ULM0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc106Q3ULM0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc106Q3ULM0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc106Q3ULM0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc106Q3ULM0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc106Q3ULM0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc106Q3ULM0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Ccdc106Q3ULM0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ccdc106Q3ULM0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc106Q3ULM0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.99■□□□□ 0.95
Ccdc106Q3ULM0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc106Q3ULM0 Gm11175-201ENSMUST00000116172 543 ntBASIC20.98■□□□□ 0.95
Ccdc106Q3ULM0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc106Q3ULM0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc106Q3ULM0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc106Q3ULM0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc106Q3ULM0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc106Q3ULM0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc106Q3ULM0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc106Q3ULM0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc106Q3ULM0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc106Q3ULM0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc106Q3ULM0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc106Q3ULM0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc106Q3ULM0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.95■□□□□ 0.94
Ccdc106Q3ULM0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.95■□□□□ 0.94
Ccdc106Q3ULM0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms