Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Srp9P49962 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Srp9P49962 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Srp9P49962 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Srp9P49962 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.53■□□□□ 0.72
Srp9P49962 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srp9P49962 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srp9P49962 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srp9P49962 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srp9P49962 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Srp9P49962 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Srp9P49962 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Srp9P49962 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Srp9P49962 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Srp9P49962 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Srp9P49962 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Srp9P49962 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Srp9P49962 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Srp9P49962 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Srp9P49962 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srp9P49962 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.49■□□□□ 0.71
Srp9P49962 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Srp9P49962 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Srp9P49962 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Srp9P49962 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Srp9P49962 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srp9P49962 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Srp9P49962 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Srp9P49962 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.48■□□□□ 0.71
Srp9P49962 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srp9P49962 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srp9P49962 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srp9P49962 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Srp9P49962 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srp9P49962 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srp9P49962 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srp9P49962 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srp9P49962 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srp9P49962 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srp9P49962 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Srp9P49962 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Srp9P49962 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Srp9P49962 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp9P49962 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp9P49962 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp9P49962 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Srp9P49962 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp9P49962 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp9P49962 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.43■□□□□ 0.7
Srp9P49962 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp9P49962 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Srp9P49962 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Srp9P49962 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Srp9P49962 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp9P49962 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Srp9P49962 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp9P49962 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp9P49962 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Srp9P49962 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp9P49962 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp9P49962 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srp9P49962 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp9P49962 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp9P49962 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp9P49962 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Srp9P49962 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp9P49962 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Srp9P49962 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp9P49962 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp9P49962 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp9P49962 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Srp9P49962 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp9P49962 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp9P49962 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Srp9P49962 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp9P49962 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srp9P49962 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp9P49962 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp9P49962 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srp9P49962 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp9P49962 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Srp9P49962 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp9P49962 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp9P49962 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srp9P49962 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srp9P49962 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.35■□□□□ 0.69
Srp9P49962 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Srp9P49962 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srp9P49962 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.34■□□□□ 0.69
Srp9P49962 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Srp9P49962 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Srp9P49962 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Srp9P49962 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srp9P49962 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srp9P49962 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srp9P49962 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Srp9P49962 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Srp9P49962 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srp9P49962 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Srp9P49962 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms