Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GdnfP48540 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GdnfP48540 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GdnfP48540 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GdnfP48540 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GdnfP48540 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GdnfP48540 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GdnfP48540 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
GdnfP48540 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GdnfP48540 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
GdnfP48540 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GdnfP48540 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GdnfP48540 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GdnfP48540 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GdnfP48540 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GdnfP48540 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GdnfP48540 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
GdnfP48540 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.14■□□□□ 0.81
GdnfP48540 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GdnfP48540 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GdnfP48540 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
GdnfP48540 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
GdnfP48540 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
GdnfP48540 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GdnfP48540 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GdnfP48540 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GdnfP48540 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GdnfP48540 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GdnfP48540 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
GdnfP48540 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
GdnfP48540 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GdnfP48540 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
GdnfP48540 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GdnfP48540 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
GdnfP48540 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GdnfP48540 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
GdnfP48540 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.09■□□□□ 0.81
GdnfP48540 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GdnfP48540 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
GdnfP48540 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GdnfP48540 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GdnfP48540 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
GdnfP48540 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.08■□□□□ 0.81
GdnfP48540 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GdnfP48540 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GdnfP48540 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
GdnfP48540 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
GdnfP48540 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GdnfP48540 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
GdnfP48540 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GdnfP48540 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GdnfP48540 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.06■□□□□ 0.8
GdnfP48540 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GdnfP48540 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GdnfP48540 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GdnfP48540 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GdnfP48540 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GdnfP48540 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GdnfP48540 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GdnfP48540 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GdnfP48540 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GdnfP48540 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GdnfP48540 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.03■□□□□ 0.8
GdnfP48540 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GdnfP48540 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GdnfP48540 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GdnfP48540 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.02■□□□□ 0.8
GdnfP48540 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GdnfP48540 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GdnfP48540 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
GdnfP48540 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GdnfP48540 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GdnfP48540 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GdnfP48540 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GdnfP48540 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GdnfP48540 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GdnfP48540 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GdnfP48540 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20■□□□□ 0.79
GdnfP48540 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
GdnfP48540 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20■□□□□ 0.79
GdnfP48540 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GdnfP48540 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GdnfP48540 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
GdnfP48540 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GdnfP48540 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.99■□□□□ 0.79
GdnfP48540 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GdnfP48540 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GdnfP48540 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GdnfP48540 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
GdnfP48540 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
GdnfP48540 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
GdnfP48540 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GdnfP48540 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GdnfP48540 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GdnfP48540 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GdnfP48540 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
GdnfP48540 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GdnfP48540 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
GdnfP48540 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GdnfP48540 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms