Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Timp3P39876 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Timp3P39876 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Timp3P39876 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Timp3P39876 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Timp3P39876 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Timp3P39876 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Timp3P39876 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Timp3P39876 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Timp3P39876 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Timp3P39876 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Timp3P39876 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Timp3P39876 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Timp3P39876 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.86■□□□□ 0.61
Timp3P39876 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Timp3P39876 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Timp3P39876 Gm6311-201ENSMUST00000073790 878 ntBASIC18.86■□□□□ 0.61
Timp3P39876 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Timp3P39876 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Timp3P39876 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Timp3P39876 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Timp3P39876 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Timp3P39876 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Timp3P39876 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Timp3P39876 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Timp3P39876 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Timp3P39876 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.83■□□□□ 0.6
Timp3P39876 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Timp3P39876 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Timp3P39876 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Timp3P39876 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Timp3P39876 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.82■□□□□ 0.6
Timp3P39876 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Timp3P39876 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Timp3P39876 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Timp3P39876 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.79■□□□□ 0.6
Timp3P39876 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Timp3P39876 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Timp3P39876 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Timp3P39876 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Timp3P39876 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Timp3P39876 Gm11175-201ENSMUST00000116172 543 ntBASIC18.78■□□□□ 0.6
Timp3P39876 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Timp3P39876 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Timp3P39876 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Timp3P39876 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Timp3P39876 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Timp3P39876 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Timp3P39876 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.76■□□□□ 0.59
Timp3P39876 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Timp3P39876 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Timp3P39876 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Timp3P39876 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Timp3P39876 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Timp3P39876 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Timp3P39876 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Timp3P39876 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.74■□□□□ 0.59
Timp3P39876 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
Timp3P39876 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Timp3P39876 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Timp3P39876 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Timp3P39876 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Timp3P39876 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Timp3P39876 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Timp3P39876 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.72■□□□□ 0.59
Timp3P39876 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Timp3P39876 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.71■□□□□ 0.59
Timp3P39876 Gm37136-201ENSMUST00000194368 194 ntBASIC18.71■□□□□ 0.59
Timp3P39876 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.71■□□□□ 0.59
Timp3P39876 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Timp3P39876 Gm4799-201ENSMUST00000095396 657 ntBASIC18.71■□□□□ 0.59
Timp3P39876 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Timp3P39876 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Timp3P39876 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Timp3P39876 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Timp3P39876 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.7■□□□□ 0.58
Timp3P39876 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.7■□□□□ 0.58
Timp3P39876 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Timp3P39876 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Timp3P39876 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Timp3P39876 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Timp3P39876 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Timp3P39876 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Timp3P39876 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Timp3P39876 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
Timp3P39876 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Timp3P39876 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Timp3P39876 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Timp3P39876 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Timp3P39876 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Timp3P39876 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Timp3P39876 Mir3960-201ENSMUST00000198213 73 ntBASIC18.66■□□□□ 0.58
Timp3P39876 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Timp3P39876 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Timp3P39876 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp3P39876 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Timp3P39876 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp3P39876 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Timp3P39876 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Timp3P39876 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms