Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TcraP01849 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TcraP01849 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.83■□□□□ 0.29
TcraP01849 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TcraP01849 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TcraP01849 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TcraP01849 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TcraP01849 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TcraP01849 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TcraP01849 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TcraP01849 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TcraP01849 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TcraP01849 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TcraP01849 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
TcraP01849 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.8■□□□□ 0.28
TcraP01849 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TcraP01849 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TcraP01849 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TcraP01849 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.79■□□□□ 0.28
TcraP01849 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TcraP01849 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TcraP01849 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TcraP01849 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TcraP01849 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TcraP01849 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TcraP01849 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TcraP01849 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TcraP01849 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TcraP01849 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
TcraP01849 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TcraP01849 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TcraP01849 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TcraP01849 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TcraP01849 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TcraP01849 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TcraP01849 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TcraP01849 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TcraP01849 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.76■□□□□ 0.27
TcraP01849 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TcraP01849 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TcraP01849 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TcraP01849 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TcraP01849 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TcraP01849 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TcraP01849 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TcraP01849 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TcraP01849 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TcraP01849 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TcraP01849 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TcraP01849 Gm16148-201ENSMUST00000119653 893 ntBASIC16.74■□□□□ 0.27
TcraP01849 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TcraP01849 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TcraP01849 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TcraP01849 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TcraP01849 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TcraP01849 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TcraP01849 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.73■□□□□ 0.27
TcraP01849 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TcraP01849 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TcraP01849 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TcraP01849 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.73■□□□□ 0.27
TcraP01849 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.73■□□□□ 0.27
TcraP01849 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TcraP01849 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TcraP01849 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TcraP01849 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TcraP01849 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TcraP01849 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TcraP01849 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TcraP01849 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TcraP01849 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TcraP01849 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TcraP01849 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TcraP01849 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TcraP01849 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TcraP01849 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TcraP01849 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TcraP01849 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TcraP01849 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TcraP01849 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TcraP01849 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TcraP01849 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TcraP01849 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TcraP01849 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TcraP01849 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TcraP01849 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
TcraP01849 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TcraP01849 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TcraP01849 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TcraP01849 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TcraP01849 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TcraP01849 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TcraP01849 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TcraP01849 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TcraP01849 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TcraP01849 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TcraP01849 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TcraP01849 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TcraP01849 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TcraP01849 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms