Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hps1O08983 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Hps1O08983 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Hps1O08983 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Hps1O08983 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hps1O08983 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Hps1O08983 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.17■□□□□ 0.98
Hps1O08983 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hps1O08983 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hps1O08983 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Hps1O08983 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.17■□□□□ 0.98
Hps1O08983 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hps1O08983 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hps1O08983 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hps1O08983 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.14■□□□□ 0.97
Hps1O08983 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hps1O08983 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hps1O08983 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hps1O08983 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hps1O08983 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hps1O08983 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hps1O08983 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.13■□□□□ 0.97
Hps1O08983 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hps1O08983 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Hps1O08983 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hps1O08983 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hps1O08983 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.12■□□□□ 0.97
Hps1O08983 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
Hps1O08983 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Hps1O08983 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hps1O08983 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hps1O08983 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hps1O08983 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hps1O08983 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hps1O08983 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Hps1O08983 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Hps1O08983 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Hps1O08983 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hps1O08983 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hps1O08983 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hps1O08983 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hps1O08983 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hps1O08983 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hps1O08983 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hps1O08983 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Hps1O08983 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hps1O08983 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Hps1O08983 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.08■□□□□ 0.97
Hps1O08983 Gm7432-201ENSMUST00000210343 879 ntBASIC21.08■□□□□ 0.97
Hps1O08983 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hps1O08983 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hps1O08983 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hps1O08983 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.06■□□□□ 0.96
Hps1O08983 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hps1O08983 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hps1O08983 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hps1O08983 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hps1O08983 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hps1O08983 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Hps1O08983 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hps1O08983 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hps1O08983 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hps1O08983 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Hps1O08983 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Hps1O08983 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hps1O08983 Nkain2-201ENSMUST00000092602 558 ntBASIC21.04■□□□□ 0.96
Hps1O08983 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hps1O08983 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hps1O08983 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hps1O08983 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.02■□□□□ 0.96
Hps1O08983 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Hps1O08983 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hps1O08983 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hps1O08983 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Hps1O08983 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hps1O08983 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Hps1O08983 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.01■□□□□ 0.95
Hps1O08983 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.01■□□□□ 0.95
Hps1O08983 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hps1O08983 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hps1O08983 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hps1O08983 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hps1O08983 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hps1O08983 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hps1O08983 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Hps1O08983 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hps1O08983 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hps1O08983 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hps1O08983 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hps1O08983 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hps1O08983 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Hps1O08983 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hps1O08983 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hps1O08983 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Hps1O08983 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.99■□□□□ 0.95
Hps1O08983 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hps1O08983 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hps1O08983 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hps1O08983 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hps1O08983 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms