Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm28038F7BCN9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28038F7BCN9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28038F7BCN9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28038F7BCN9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm28038F7BCN9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28038F7BCN9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm28038F7BCN9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28038F7BCN9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Gm28038F7BCN9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28038F7BCN9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28038F7BCN9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm28038F7BCN9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm28038F7BCN9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28038F7BCN9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28038F7BCN9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28038F7BCN9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm28038F7BCN9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28038F7BCN9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm28038F7BCN9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28038F7BCN9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28038F7BCN9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28038F7BCN9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28038F7BCN9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28038F7BCN9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28038F7BCN9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28038F7BCN9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28038F7BCN9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28038F7BCN9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28038F7BCN9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Gm28038F7BCN9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm28038F7BCN9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28038F7BCN9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28038F7BCN9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm28038F7BCN9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28038F7BCN9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28038F7BCN9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28038F7BCN9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28038F7BCN9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28038F7BCN9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28038F7BCN9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm28038F7BCN9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28038F7BCN9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28038F7BCN9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Gm28038F7BCN9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28038F7BCN9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28038F7BCN9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28038F7BCN9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28038F7BCN9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28038F7BCN9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm28038F7BCN9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gm28038F7BCN9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28038F7BCN9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Gm28038F7BCN9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Gm28038F7BCN9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28038F7BCN9 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.02■□□□□ 0.32
Gm28038F7BCN9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.02■□□□□ 0.32
Gm28038F7BCN9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28038F7BCN9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Gm28038F7BCN9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Gm28038F7BCN9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28038F7BCN9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm28038F7BCN9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28038F7BCN9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17■□□□□ 0.31
Gm28038F7BCN9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28038F7BCN9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28038F7BCN9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28038F7BCN9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gm28038F7BCN9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28038F7BCN9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28038F7BCN9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28038F7BCN9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28038F7BCN9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28038F7BCN9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Gm28038F7BCN9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Gm28038F7BCN9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28038F7BCN9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm28038F7BCN9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28038F7BCN9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28038F7BCN9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28038F7BCN9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28038F7BCN9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm28038F7BCN9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm28038F7BCN9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Gm28038F7BCN9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gm28038F7BCN9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28038F7BCN9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28038F7BCN9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28038F7BCN9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm28038F7BCN9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gm28038F7BCN9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.95■□□□□ 0.3
Gm28038F7BCN9 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.94■□□□□ 0.3
Gm28038F7BCN9 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.94■□□□□ 0.3
Gm28038F7BCN9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm28038F7BCN9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28038F7BCN9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28038F7BCN9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28038F7BCN9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm28038F7BCN9 Particl-201ENSMUST00000205370 1560 ntBASIC16.93■□□□□ 0.3
Gm28038F7BCN9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms