Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3543D3Z235 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3543D3Z235 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3543D3Z235 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3543D3Z235 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3543D3Z235 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3543D3Z235 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3543D3Z235 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3543D3Z235 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3543D3Z235 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3543D3Z235 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3543D3Z235 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.87■□□□□ 0.93
Gm3543D3Z235 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.87■□□□□ 0.93
Gm3543D3Z235 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3543D3Z235 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3543D3Z235 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3543D3Z235 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Gm3543D3Z235 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3543D3Z235 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3543D3Z235 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3543D3Z235 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3543D3Z235 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Gm3543D3Z235 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Gm3543D3Z235 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3543D3Z235 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm3543D3Z235 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm3543D3Z235 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.82■□□□□ 0.92
Gm3543D3Z235 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.82■□□□□ 0.92
Gm3543D3Z235 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Gm3543D3Z235 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.8■□□□□ 0.92
Gm3543D3Z235 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3543D3Z235 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm3543D3Z235 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Gm3543D3Z235 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.78■□□□□ 0.92
Gm3543D3Z235 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Gm3543D3Z235 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.77■□□□□ 0.92
Gm3543D3Z235 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Gm3543D3Z235 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3543D3Z235 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gm3543D3Z235 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.76■□□□□ 0.91
Gm3543D3Z235 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3543D3Z235 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3543D3Z235 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3543D3Z235 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3543D3Z235 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3543D3Z235 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3543D3Z235 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3543D3Z235 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3543D3Z235 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3543D3Z235 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3543D3Z235 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3543D3Z235 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3543D3Z235 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3543D3Z235 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3543D3Z235 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Gm3543D3Z235 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3543D3Z235 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3543D3Z235 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3543D3Z235 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3543D3Z235 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.7■□□□□ 0.9
Gm3543D3Z235 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3543D3Z235 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3543D3Z235 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.7■□□□□ 0.9
Gm3543D3Z235 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3543D3Z235 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3543D3Z235 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3543D3Z235 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Gm3543D3Z235 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3543D3Z235 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3543D3Z235 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm3543D3Z235 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3543D3Z235 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3543D3Z235 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3543D3Z235 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3543D3Z235 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3543D3Z235 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gm3543D3Z235 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3543D3Z235 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Gm3543D3Z235 Gm6311-201ENSMUST00000073790 878 ntBASIC20.65■□□□□ 0.9
Gm3543D3Z235 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3543D3Z235 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3543D3Z235 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm3543D3Z235 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3543D3Z235 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3543D3Z235 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Gm3543D3Z235 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.63■□□□□ 0.89
Gm3543D3Z235 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3543D3Z235 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm3543D3Z235 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3543D3Z235 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3543D3Z235 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3543D3Z235 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm3543D3Z235 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm3543D3Z235 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3543D3Z235 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3543D3Z235 Gm37136-201ENSMUST00000194368 194 ntBASIC20.61■□□□□ 0.89
Gm3543D3Z235 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3543D3Z235 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3543D3Z235 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3543D3Z235 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms