Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vma21-psA0A140T8R2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21-psA0A140T8R2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21-psA0A140T8R2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21-psA0A140T8R2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21-psA0A140T8R2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vma21-psA0A140T8R2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vma21-psA0A140T8R2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vma21-psA0A140T8R2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21-psA0A140T8R2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21-psA0A140T8R2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21-psA0A140T8R2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vma21-psA0A140T8R2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vma21-psA0A140T8R2 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.44■□□□□ 0.54
Vma21-psA0A140T8R2 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.44■□□□□ 0.54
Vma21-psA0A140T8R2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vma21-psA0A140T8R2 Particl-201ENSMUST00000205370 1560 ntBASIC18.42■□□□□ 0.54
Vma21-psA0A140T8R2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vma21-psA0A140T8R2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vma21-psA0A140T8R2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vma21-psA0A140T8R2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.39■□□□□ 0.54
Vma21-psA0A140T8R2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vma21-psA0A140T8R2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vma21-psA0A140T8R2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Vma21-psA0A140T8R2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vma21-psA0A140T8R2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vma21-psA0A140T8R2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vma21-psA0A140T8R2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vma21-psA0A140T8R2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vma21-psA0A140T8R2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vma21-psA0A140T8R2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21-psA0A140T8R2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21-psA0A140T8R2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21-psA0A140T8R2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21-psA0A140T8R2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vma21-psA0A140T8R2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vma21-psA0A140T8R2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vma21-psA0A140T8R2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21-psA0A140T8R2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21-psA0A140T8R2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21-psA0A140T8R2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21-psA0A140T8R2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.28■□□□□ 0.52
Vma21-psA0A140T8R2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vma21-psA0A140T8R2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vma21-psA0A140T8R2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms