Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vma21-psA0A140T8R2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21-psA0A140T8R2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21-psA0A140T8R2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21-psA0A140T8R2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21-psA0A140T8R2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21-psA0A140T8R2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Vma21-psA0A140T8R2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21-psA0A140T8R2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vma21-psA0A140T8R2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vma21-psA0A140T8R2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21-psA0A140T8R2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21-psA0A140T8R2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21-psA0A140T8R2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vma21-psA0A140T8R2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vma21-psA0A140T8R2 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.44■□□□□ 0.54
Vma21-psA0A140T8R2 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.44■□□□□ 0.54
Vma21-psA0A140T8R2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vma21-psA0A140T8R2 Particl-201ENSMUST00000205370 1560 ntBASIC18.42■□□□□ 0.54
Vma21-psA0A140T8R2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vma21-psA0A140T8R2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Vma21-psA0A140T8R2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Vma21-psA0A140T8R2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vma21-psA0A140T8R2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.39■□□□□ 0.54
Vma21-psA0A140T8R2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vma21-psA0A140T8R2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vma21-psA0A140T8R2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Vma21-psA0A140T8R2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vma21-psA0A140T8R2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vma21-psA0A140T8R2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vma21-psA0A140T8R2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vma21-psA0A140T8R2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vma21-psA0A140T8R2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vma21-psA0A140T8R2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vma21-psA0A140T8R2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vma21-psA0A140T8R2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vma21-psA0A140T8R2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21-psA0A140T8R2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21-psA0A140T8R2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21-psA0A140T8R2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vma21-psA0A140T8R2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vma21-psA0A140T8R2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vma21-psA0A140T8R2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Vma21-psA0A140T8R2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vma21-psA0A140T8R2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vma21-psA0A140T8R2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21-psA0A140T8R2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21-psA0A140T8R2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21-psA0A140T8R2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vma21-psA0A140T8R2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.28■□□□□ 0.52
Vma21-psA0A140T8R2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vma21-psA0A140T8R2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Vma21-psA0A140T8R2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vma21-psA0A140T8R2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vma21-psA0A140T8R2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms