Protein–RNA interactions for Protein: A0A0A6YXZ4

Ighv1-62-2, Immunoglobulin heavy variable 1-62-2 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-62-2A0A0A6YXZ4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-62-2A0A0A6YXZ4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-62-2A0A0A6YXZ4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv1-62-2A0A0A6YXZ4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.63■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.62■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.6■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.59■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.59■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ighv1-62-2A0A0A6YXZ4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Gm25238-201ENSMUST00000174914 89 ntBASIC16.58■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.57■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Mipep-204ENSMUST00000225043 1548 ntBASIC16.56■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.56■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-62-2A0A0A6YXZ4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.52■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.5■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.5■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Iqck-206ENSMUST00000208658 2891 ntBASIC16.46■□□□□ 0.23
Ighv1-62-2A0A0A6YXZ4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-62-2A0A0A6YXZ4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms