Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sirpb1bA0A0A6YXN8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.33■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Gm11599-201ENSMUST00000118720 878 ntBASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.3■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.24■□□□□ 0.83
Sirpb1bA0A0A6YXN8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1bA0A0A6YXN8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1bA0A0A6YXN8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sirpb1bA0A0A6YXN8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.16■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms