Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sirpb1bA0A0A6YXN8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sirpb1bA0A0A6YXN8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.33■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Gm11599-201ENSMUST00000118720 878 ntBASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.31■□□□□ 0.84
Sirpb1bA0A0A6YXN8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.3■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sirpb1bA0A0A6YXN8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.24■□□□□ 0.83
Sirpb1bA0A0A6YXN8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1bA0A0A6YXN8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1bA0A0A6YXN8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.21■□□□□ 0.83
Sirpb1bA0A0A6YXN8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sirpb1bA0A0A6YXN8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.16■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sirpb1bA0A0A6YXN8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sirpb1bA0A0A6YXN8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms