Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav6d-7A0A075B6B0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6d-7A0A075B6B0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6d-7A0A075B6B0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6d-7A0A075B6B0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6d-7A0A075B6B0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav6d-7A0A075B6B0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav6d-7A0A075B6B0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6d-7A0A075B6B0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6d-7A0A075B6B0 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.77■□□□□ 0.44
Trav6d-7A0A075B6B0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Trav6d-7A0A075B6B0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.77■□□□□ 0.44
Trav6d-7A0A075B6B0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Trav6d-7A0A075B6B0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav6d-7A0A075B6B0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6d-7A0A075B6B0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trav6d-7A0A075B6B0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trav6d-7A0A075B6B0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav6d-7A0A075B6B0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-7A0A075B6B0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-7A0A075B6B0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-7A0A075B6B0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6d-7A0A075B6B0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-7A0A075B6B0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-7A0A075B6B0 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.75■□□□□ 0.43
Trav6d-7A0A075B6B0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6d-7A0A075B6B0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-7A0A075B6B0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Trav6d-7A0A075B6B0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav6d-7A0A075B6B0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-7A0A075B6B0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.74■□□□□ 0.43
Trav6d-7A0A075B6B0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-7A0A075B6B0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6d-7A0A075B6B0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-7A0A075B6B0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-7A0A075B6B0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-7A0A075B6B0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-7A0A075B6B0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6d-7A0A075B6B0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav6d-7A0A075B6B0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6d-7A0A075B6B0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6d-7A0A075B6B0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6d-7A0A075B6B0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.71■□□□□ 0.43
Trav6d-7A0A075B6B0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Trav6d-7A0A075B6B0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6d-7A0A075B6B0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav6d-7A0A075B6B0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-7A0A075B6B0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav6d-7A0A075B6B0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-7A0A075B6B0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-7A0A075B6B0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav6d-7A0A075B6B0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-7A0A075B6B0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6d-7A0A075B6B0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6d-7A0A075B6B0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6d-7A0A075B6B0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6d-7A0A075B6B0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Trav6d-7A0A075B6B0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6d-7A0A075B6B0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6d-7A0A075B6B0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6d-7A0A075B6B0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6d-7A0A075B6B0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6d-7A0A075B6B0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trav6d-7A0A075B6B0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6d-7A0A075B6B0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-7A0A075B6B0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav6d-7A0A075B6B0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-7A0A075B6B0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-7A0A075B6B0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6d-7A0A075B6B0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav6d-7A0A075B6B0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.64■□□□□ 0.41
Trav6d-7A0A075B6B0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav6d-7A0A075B6B0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav6d-7A0A075B6B0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6d-7A0A075B6B0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6d-7A0A075B6B0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav6d-7A0A075B6B0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6d-7A0A075B6B0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.62■□□□□ 0.41
Trav6d-7A0A075B6B0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6d-7A0A075B6B0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6d-7A0A075B6B0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav6d-7A0A075B6B0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6d-7A0A075B6B0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-7A0A075B6B0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-7A0A075B6B0 Gm7432-201ENSMUST00000210343 879 ntBASIC17.61■□□□□ 0.41
Trav6d-7A0A075B6B0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-7A0A075B6B0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-7A0A075B6B0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6d-7A0A075B6B0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav6d-7A0A075B6B0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav6d-7A0A075B6B0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms