Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3-4A0A075B654 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav3-4A0A075B654 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav3-4A0A075B654 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav3-4A0A075B654 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav3-4A0A075B654 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav3-4A0A075B654 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav3-4A0A075B654 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav3-4A0A075B654 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav3-4A0A075B654 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav3-4A0A075B654 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav3-4A0A075B654 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav3-4A0A075B654 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav3-4A0A075B654 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav3-4A0A075B654 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav3-4A0A075B654 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav3-4A0A075B654 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav3-4A0A075B654 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav3-4A0A075B654 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav3-4A0A075B654 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav3-4A0A075B654 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav3-4A0A075B654 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav3-4A0A075B654 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav3-4A0A075B654 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav3-4A0A075B654 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav3-4A0A075B654 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav3-4A0A075B654 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Trav3-4A0A075B654 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav3-4A0A075B654 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav3-4A0A075B654 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav3-4A0A075B654 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav3-4A0A075B654 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav3-4A0A075B654 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav3-4A0A075B654 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav3-4A0A075B654 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.52■□□□□ 0.07
Trav3-4A0A075B654 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav3-4A0A075B654 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.52■□□□□ 0.07
Trav3-4A0A075B654 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav3-4A0A075B654 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav3-4A0A075B654 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav3-4A0A075B654 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Trav3-4A0A075B654 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3-4A0A075B654 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3-4A0A075B654 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3-4A0A075B654 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3-4A0A075B654 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav3-4A0A075B654 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Trav3-4A0A075B654 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav3-4A0A075B654 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav3-4A0A075B654 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.49■□□□□ 0.07
Trav3-4A0A075B654 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Trav3-4A0A075B654 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav3-4A0A075B654 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3-4A0A075B654 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3-4A0A075B654 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3-4A0A075B654 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav3-4A0A075B654 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3-4A0A075B654 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3-4A0A075B654 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3-4A0A075B654 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3-4A0A075B654 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3-4A0A075B654 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3-4A0A075B654 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav3-4A0A075B654 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3-4A0A075B654 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3-4A0A075B654 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3-4A0A075B654 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3-4A0A075B654 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3-4A0A075B654 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3-4A0A075B654 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav3-4A0A075B654 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav3-4A0A075B654 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3-4A0A075B654 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3-4A0A075B654 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3-4A0A075B654 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3-4A0A075B654 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3-4A0A075B654 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav3-4A0A075B654 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3-4A0A075B654 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3-4A0A075B654 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3-4A0A075B654 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3-4A0A075B654 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav3-4A0A075B654 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav3-4A0A075B654 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav3-4A0A075B654 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3-4A0A075B654 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3-4A0A075B654 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trav3-4A0A075B654 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3-4A0A075B654 Notumos-201ENSMUST00000151998 2659 ntBASIC15.43■□□□□ 0.06
Trav3-4A0A075B654 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3-4A0A075B654 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav3-4A0A075B654 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 142 ms