Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AL079343.1-201ENST00000572358 1771 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 RNU1-75P-201ENST00000347264 129 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 MIR30E-201ENST00000362104 92 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 Y_RNA.41-201ENST00000362646 102 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 Y_RNA.359-201ENST00000365498 102 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 RNU6-805P-201ENST00000365643 106 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 RNU6-517P-201ENST00000384362 110 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 Z99755.1-201ENST00000414048 380 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 RPL23AP39-201ENST00000415533 405 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC007390.1-201ENST00000415722 356 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 YPEL5P1-201ENST00000419731 367 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC005300.1-201ENST00000428401 373 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC005326.1-201ENST00000429197 123 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AL158071.1-201ENST00000430315 461 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 NEK4P1-201ENST00000433383 879 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 MTND1P4-201ENST00000435196 415 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 MTND1P30-201ENST00000441241 901 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 BMI1P1-201ENST00000445879 941 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 TPT1P7-201ENST00000458300 517 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC104685.1-201ENST00000502445 371 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 TXNP6-201ENST00000510190 310 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 OR5AK1P-201ENST00000524837 922 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 CR383656.7-201ENST00000548164 174 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 MIR4276-201ENST00000584832 70 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 MTCYBP22-201ENST00000603788 447 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AL031176.1-201ENST00000604554 466 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC239868.4-201ENST00000608318 671 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC087241.4-201ENST00000612441 480 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AL390240.1-201ENST00000612950 384 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AC010678.1-201ENST00000614118 713 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 AL110115.1-201ENST00000614396 364 ntBASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.61□□□□□ -1.83
DDX43Q9NXZ2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 RNU6-173P-201ENST00000364215 104 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 RNU6-253P-201ENST00000384730 105 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 RNU2-47P-201ENST00000410649 186 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 RNA5SP31-201ENST00000411144 127 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 MTCO2P5-201ENST00000422621 426 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 MED14P1-201ENST00000430517 648 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC004866.2-201ENST00000438285 481 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 ST13P20-201ENST00000447996 1065 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 EPS15P1-201ENST00000448836 336 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC072039.1-201ENST00000477611 581 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 RPS4XP22-201ENST00000480755 780 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC006499.2-201ENST00000513470 337 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 RNY4P37-201ENST00000516225 96 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC093331.1-201ENST00000521474 169 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 MTATP6P3-201ENST00000581686 676 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC087683.1-201ENST00000591187 441 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 BDH2P1-201ENST00000602288 736 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC079089.3-201ENST00000603094 673 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AC022306.2-201ENST00000617563 647 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 PLCE1P1-201ENST00000622094 305 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 AL136164.4-201ENST00000625013 2135 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 CRYM-AS1-204ENST00000637983 556 ntBASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
DDX43Q9NXZ2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RPL23AP57-201ENST00000332361 466 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RNU6-433P-201ENST00000363216 104 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RNU6-660P-201ENST00000364566 109 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 Y_RNA.302-201ENST00000364997 102 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 Y_RNA.517-201ENST00000384551 106 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RPL23AP29-201ENST00000397284 453 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AL591034.1-201ENST00000407447 340 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 RNA5SP120-201ENST00000410900 112 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 ELOCP17-201ENST00000414751 326 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AL592447.1-201ENST00000447592 540 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 ARPC3P5-201ENST00000448802 534 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 AL353691.1-201ENST00000451332 387 ntBASIC3.59□□□□□ -1.83
DDX43Q9NXZ2 SSXP4-201ENST00000451349 245 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms