Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-397P-201ENST00000516226 104 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 SNORA81.3-201ENST00000517283 198 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.24□□□□□ -1.57
NFKB1P19838 AP003733.2-201ENST00000529409 171 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 AC024940.3-201ENST00000538551 316 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.24□□□□□ -1.57
NFKB1P19838 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.24□□□□□ -1.57
NFKB1P19838 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.24□□□□□ -1.57
NFKB1P19838 AC009779.6-201ENST00000603972 165 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 AL160281.1-201ENST00000605307 311 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 RNU6-85P-201ENST00000605989 107 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 AC104623.2-202ENST00000623477 4002 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.24□□□□□ -1.57
NFKB1P19838 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NFKB1P19838 MUC2-202ENST00000613187 4845 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NFKB1P19838 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
NFKB1P19838 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NFKB1P19838 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NFKB1P19838 Y_RNA.48-201ENST00000362710 103 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 Y_RNA.416-201ENST00000384014 113 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 MIR625-201ENST00000385047 85 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 DUTP5-201ENST00000406790 469 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 MIR548H3-201ENST00000408771 118 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 AL030996.1-201ENST00000411430 235 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.23□□□□□ -1.57
NFKB1P19838 AC092447.6-201ENST00000414578 210 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 AC099677.1-201ENST00000420575 175 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.23□□□□□ -1.57
NFKB1P19838 AC073063.1-201ENST00000434352 607 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 OR2AQ1P-201ENST00000451972 200 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 PRELID3BP1-201ENST00000457142 540 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.23□□□□□ -1.57
NFKB1P19838 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.23□□□□□ -1.57
NFKB1P19838 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.23□□□□□ -1.57
NFKB1P19838 ENPP7P11-201ENST00000505915 627 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.23□□□□□ -1.57
NFKB1P19838 AC068446.3-201ENST00000555285 382 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.23□□□□□ -1.57
NFKB1P19838 AC006272.2-201ENST00000594725 163 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.23□□□□□ -1.57
NFKB1P19838 AC006023.2-201ENST00000609916 167 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 MIR6768-201ENST00000610734 72 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 AC064801.1-201ENST00000612025 407 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 RPSAP73-201ENST00000614820 330 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.23□□□□□ -1.57
NFKB1P19838 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NFKB1P19838 AC063976.2-201ENST00000425667 3556 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 AC004817.4-201ENST00000602396 3625 ntBASIC5.23□□□□□ -1.57
NFKB1P19838 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.23□□□□□ -1.57
NFKB1P19838 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NFKB1P19838 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.23□□□□□ -1.57
NFKB1P19838 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NFKB1P19838 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NFKB1P19838 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NFKB1P19838 AC073136.1-201ENST00000449426 2884 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.22□□□□□ -1.57
NFKB1P19838 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NFKB1P19838 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NFKB1P19838 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NFKB1P19838 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
NFKB1P19838 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NFKB1P19838 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NFKB1P19838 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NFKB1P19838 RNU6-371P-201ENST00000364283 108 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 SNORD73A-201ENST00000386062 65 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 MT-TC-201ENST00000387405 66 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 RNU6-817P-201ENST00000391083 104 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 CYB5AP4-201ENST00000396692 399 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 AC013442.1-201ENST00000397347 228 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 U3.32-201ENST00000408116 212 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.22□□□□□ -1.57
NFKB1P19838 AL121871.1-201ENST00000443413 436 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 LINC01399-202ENST00000458450 244 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 COPS8P2-201ENST00000473228 627 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 MED28P2-201ENST00000475771 317 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 RPS21P4-201ENST00000487122 248 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.22□□□□□ -1.57
NFKB1P19838 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.22□□□□□ -1.57
NFKB1P19838 Y_RNA.687-201ENST00000516558 91 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 RN7SKP82-201ENST00000516786 223 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 RN7SKP277-201ENST00000516895 283 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 AC006349.1-201ENST00000555526 235 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
NFKB1P19838 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.22□□□□□ -1.57
NFKB1P19838 AL390123.1-201ENST00000603216 237 ntBASIC5.22□□□□□ -1.57
NFKB1P19838 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.22□□□□□ -1.57
NFKB1P19838 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NFKB1P19838 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NFKB1P19838 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NFKB1P19838 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NFKB1P19838 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms