Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
EPHB3P54753 SALL4P2-201ENST00000423288 2910 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC090971.4-201ENST00000560291 1800 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC011460.1-201ENST00000636268 1834 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 SNORD113-7-201ENST00000363762 77 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 RNU6-1040P-201ENST00000383974 107 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
EPHB3P54753 BX323014.1-201ENST00000412876 237 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.75□□□□□ -1.65
EPHB3P54753 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.75□□□□□ -1.65
EPHB3P54753 RPL37P1-201ENST00000432310 284 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AL160004.2-201ENST00000432935 350 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.75□□□□□ -1.65
EPHB3P54753 YWHAZP8-201ENST00000436935 731 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 SUMO1P3-201ENST00000439961 304 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 PHBP16-201ENST00000446318 950 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC104058.1-201ENST00000448028 297 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 SUMO1P2-201ENST00000452524 304 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 MTND1P9-201ENST00000453775 944 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 TRBV26-201ENST00000456572 344 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC006511.1-201ENST00000470614 315 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.75□□□□□ -1.65
EPHB3P54753 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.75□□□□□ -1.65
EPHB3P54753 SNORA25.10-201ENST00000515926 124 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.75□□□□□ -1.65
EPHB3P54753 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.75□□□□□ -1.65
EPHB3P54753 LSM6P2-201ENST00000552208 177 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC010653.1-201ENST00000571108 881 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 MIR4703-201ENST00000577728 79 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC110743.1-201ENST00000584870 478 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.75□□□□□ -1.65
EPHB3P54753 AC073539.2-201ENST00000597113 165 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.75□□□□□ -1.65
EPHB3P54753 AL670379.11-201ENST00000604059 253 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AL670379.10-201ENST00000604330 253 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AL670379.12-201ENST00000605291 253 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AL670379.9-201ENST00000605428 253 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 PRR13P7-201ENST00000605538 430 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 HSPE1P14-201ENST00000605812 302 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.75□□□□□ -1.65
EPHB3P54753 AC103710.2-201ENST00000609912 942 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.75□□□□□ -1.65
EPHB3P54753 AC114781.5-201ENST00000615297 108 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 THAP12P5-201ENST00000405864 2275 ntBASIC4.75□□□□□ -1.65
EPHB3P54753 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
EPHB3P54753 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.74□□□□□ -1.65
EPHB3P54753 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
EPHB3P54753 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.74□□□□□ -1.65
EPHB3P54753 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 SNORA62.1-201ENST00000364287 154 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 RNY3P13-201ENST00000365542 102 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 Y_RNA.378-201ENST00000365652 113 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 SET-203ENST00000372688 801 ntTSL 2 BASIC4.74□□□□□ -1.65
EPHB3P54753 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.74□□□□□ -1.65
EPHB3P54753 RNU6-1207P-201ENST00000384343 107 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 RNU6-1026P-201ENST00000384465 108 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 U3.20-201ENST00000390909 217 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 AL024474.1-201ENST00000404655 591 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.74□□□□□ -1.65
EPHB3P54753 MTND1P17-201ENST00000448961 204 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AC239809.1-201ENST00000450470 217 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AL118520.1-201ENST00000450770 291 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 HMGB1P15-201ENST00000453854 435 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 CYCSP34-201ENST00000458172 304 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 MIR2053-201ENST00000459295 91 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 RN7SL98P-201ENST00000462271 300 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 TRBVA-201ENST00000498804 316 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.74□□□□□ -1.65
EPHB3P54753 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.74□□□□□ -1.65
EPHB3P54753 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.74□□□□□ -1.65
EPHB3P54753 RANP9-201ENST00000519957 271 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AC011979.2-201ENST00000527568 352 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AC109635.4-202ENST00000531666 412 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.74□□□□□ -1.65
EPHB3P54753 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.74□□□□□ -1.65
EPHB3P54753 AC128657.1-201ENST00000549459 145 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 SETP2-201ENST00000553886 926 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.74□□□□□ -1.65
EPHB3P54753 AC053481.3-201ENST00000577881 843 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 MIR4472-2-201ENST00000582069 67 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 RPL23AP92-201ENST00000603609 255 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 uc_338.34-201ENST00000617467 174 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AC015914.2-201ENST00000618167 288 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AC244100.1-202ENST00000621554 382 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 AL159972.1-201ENST00000625150 448 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.74□□□□□ -1.65
EPHB3P54753 MAPK10-286ENST00000641208 8747 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 MAPK10-320ENST00000641462 6696 ntBASIC4.74□□□□□ -1.65
EPHB3P54753 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHB3P54753 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms