Protein–RNA interactions for Protein: A0A087X0R7

SENP3-EIF4A1, SENP3-EIF4A1 readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1A0A087X0R7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNF6P1-201ENST00000444889 1784 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL512646.1-201ENST00000269395 1077 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Y_RNA.378-201ENST00000365652 113 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Y_RNA.380-201ENST00000365663 111 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNU6-328P-201ENST00000390887 106 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 NDUFS5P1-201ENST00000405668 289 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL137014.1-201ENST00000420490 1226 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 OR1H1P-201ENST00000448731 937 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNU6-1023P-201ENST00000516137 106 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RN7SKP276-201ENST00000516242 268 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Y_RNA.680-201ENST00000516441 93 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 MTND4P7-201ENST00000523876 130 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 MIR3672-201ENST00000584290 82 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL008729.2-201ENST00000606393 473 ntBASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNU6-490P-201ENST00000362985 107 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Y_RNA.167-201ENST00000363735 109 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNA5SP509-201ENST00000364577 119 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 SNORA20.1-201ENST00000364790 130 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Y_RNA.291-201ENST00000364886 113 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC007738.1-201ENST00000413892 348 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC096632.1-201ENST00000427395 310 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RPL23AP71-201ENST00000470966 469 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RPS27AP1-201ENST00000475545 471 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RPL23AP94-201ENST00000512518 302 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNU6-1038P-201ENST00000516516 104 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC090136.1-201ENST00000520009 240 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AP000907.2-201ENST00000530827 353 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Z82243.1-201ENST00000609432 473 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC010378.1-201ENST00000619270 362 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 MTND5P7-201ENST00000413558 1798 ntBASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL136164.3-201ENST00000624429 3978 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC010300.1-201ENST00000600671 5134 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 HSPE1P11-201ENST00000339579 310 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNU1-83P-201ENST00000363426 164 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RHOT1P2-201ENST00000366423 333 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Y_RNA.428-201ENST00000384078 102 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 Y_RNA.496-201ENST00000384444 101 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 SNORA75.6-201ENST00000391318 127 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL391417.1-201ENST00000404100 426 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 EIF4EP1-201ENST00000422311 642 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 PIGPP3-201ENST00000425307 415 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 PSMA6P3-201ENST00000428242 164 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AL451139.1-201ENST00000434718 346 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 SNRPFP3-201ENST00000457792 225 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RN7SL517P-201ENST00000462240 305 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RPL7P43-201ENST00000478876 753 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC090453.1-201ENST00000495560 436 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC092436.1-201ENST00000506450 503 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 AC007016.1-201ENST00000512110 244 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNU6-475P-201ENST00000516073 104 ntBASIC6.25□□□□□ -1.41
SENP3-EIF4A1A0A087X0R7 RNU6-1016P-201ENST00000516689 94 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms