Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC144AA2RUR9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 Y_RNA.355-201ENST00000365462 98 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 DEFB109C-201ENST00000382575 264 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 DEFB109B-201ENST00000382656 264 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 RNU2-20P-201ENST00000410425 191 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 Z99714.1-201ENST00000450463 807 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 AC104115.2-201ENST00000523026 687 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 MIR4255-201ENST00000579351 72 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 AC068790.3-201ENST00000602988 553 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 MIR8070-201ENST00000616510 88 ntBASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC144AA2RUR9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 MIR144-201ENST00000384886 86 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 SNORA40.18-201ENST00000391200 128 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 MTCO3P4-201ENST00000419236 787 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 HSPE1P1-201ENST00000421494 318 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 AC124916.1-201ENST00000444020 547 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 AL035407.2-201ENST00000454090 378 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 RPL23AP63-201ENST00000498752 471 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 AC008562.1-201ENST00000521763 330 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 OR4V1P-201ENST00000525394 1140 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 AC092954.1-201ENST00000609121 445 ntBASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC144AA2RUR9 MIR337-201ENST00000362281 93 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 RNY1P10-201ENST00000363268 113 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 RNU6-457P-201ENST00000363999 107 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 RNU6-670P-201ENST00000364312 104 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 SNORA51.11-201ENST00000384442 131 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 MIR499A-201ENST00000384903 122 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 AC104689.1-201ENST00000473356 768 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 SYPL1P1-201ENST00000473622 768 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 RNU6-711P-201ENST00000517255 106 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 AC023158.1-201ENST00000561632 1025 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 AC115989.2-201ENST00000578640 563 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 MFSD8-245ENST00000641743 948 ntBASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC144AA2RUR9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 RNA5SP190-201ENST00000365222 118 ntBASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 AP004371.1-201ENST00000525240 214 ntBASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 AL356280.1-201ENST00000603614 379 ntBASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 MIR6895-201ENST00000613497 78 ntBASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC144AA2RUR9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 FGF7P8-201ENST00000402994 292 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 RNA5SP492-201ENST00000411330 114 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 RFESDP1-201ENST00000422350 461 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 AL590664.1-201ENST00000448065 339 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 RPS24P6-201ENST00000452670 400 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 AC022616.2-201ENST00000523185 300 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 AP000790.1-201ENST00000528891 737 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 AC084768.2-201ENST00000622736 221 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 RNU6-661P-201ENST00000362409 107 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 RNU6-1293P-201ENST00000384077 107 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 U8.10-201ENST00000384260 133 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 AL591034.1-201ENST00000407447 340 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 AL358453.1-201ENST00000422522 250 ntBASIC2.68□□□□□ -1.98
CCDC144AA2RUR9 RPS7P2-201ENST00000435134 607 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms