Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.5-201ENST00000362334 102 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 RNU6-1115P-201ENST00000362490 106 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 RNU6-39P-201ENST00000384344 107 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 MIR659-201ENST00000384963 97 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 SNORA68.2-201ENST00000391263 128 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AL080315.1-201ENST00000406055 466 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 MCFD2P1-201ENST00000417812 300 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC018865.2-201ENST00000423631 129 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 BTF3P6-201ENST00000448054 499 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.79□□□□□ -1.64
EPHB3P54753 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.79□□□□□ -1.64
EPHB3P54753 RNU7-180P-201ENST00000459240 63 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
EPHB3P54753 AC010618.1-201ENST00000469924 477 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC103987.1-201ENST00000473394 348 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.79□□□□□ -1.64
EPHB3P54753 RN7SL810P-201ENST00000493031 276 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC092436.1-201ENST00000506450 503 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 MRPS35P2-201ENST00000508242 191 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC104136.1-201ENST00000512969 394 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 RNA5SP464-201ENST00000516251 108 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 RNU6-566P-201ENST00000516790 107 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC103843.2-201ENST00000530523 682 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 PTP4A1P6-201ENST00000531034 478 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB3P54753 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.79□□□□□ -1.64
EPHB3P54753 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB3P54753 AL118558.2-201ENST00000556294 238 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB3P54753 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.79□□□□□ -1.64
EPHB3P54753 AC233702.9-201ENST00000581528 203 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 UBE2L4-201ENST00000587688 464 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.79□□□□□ -1.64
EPHB3P54753 AC115085.1-201ENST00000588924 229 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AL109918.3-201ENST00000603072 338 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 MIR6716-201ENST00000613413 80 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC123768.4-201ENST00000616244 701 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC098657.3-201ENST00000620434 263 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 CR392039.4-201ENST00000624968 501 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB3P54753 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.79□□□□□ -1.64
EPHB3P54753 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB3P54753 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB3P54753 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.79□□□□□ -1.64
EPHB3P54753 AC121333.1-201ENST00000567488 2709 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHB3P54753 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB3P54753 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHB3P54753 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
EPHB3P54753 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
EPHB3P54753 AC073136.1-201ENST00000449426 2884 ntBASIC4.79□□□□□ -1.64
EPHB3P54753 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB3P54753 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.78□□□□□ -1.64
EPHB3P54753 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.78□□□□□ -1.64
EPHB3P54753 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.78□□□□□ -1.64
EPHB3P54753 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB3P54753 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
EPHB3P54753 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB3P54753 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB3P54753 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHB3P54753 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB3P54753 AL731566.1-201ENST00000620490 1937 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB3P54753 AC134882.1-201ENST00000603738 1676 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHB3P54753 HSPE1P11-201ENST00000339579 310 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 RNU6-28P-201ENST00000362378 107 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 Y_RNA.176-201ENST00000363815 109 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 Y_RNA.212-201ENST00000364177 102 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 DEFB109C-201ENST00000382575 264 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 DEFB109B-201ENST00000382656 264 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 SNORD3H-201ENST00000384486 214 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 RNU6-441P-201ENST00000384545 106 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 MIR558-201ENST00000384920 94 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 SSXP10-201ENST00000402595 565 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AL139397.2-201ENST00000404529 772 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AL023807.1-201ENST00000407932 359 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 RNU2-29P-201ENST00000410423 189 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 RNU6-954P-201ENST00000411355 107 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AL590609.2-201ENST00000421430 368 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHB3P54753 CKS1BP6-201ENST00000424932 240 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AC114495.1-201ENST00000441274 436 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AL591623.2-201ENST00000449978 222 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 RPS29P15-201ENST00000458329 171 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 RNU7-182P-201ENST00000459009 62 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHB3P54753 RN7SKP24-201ENST00000515888 284 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHB3P54753 AP002404.1-201ENST00000532005 451 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AC107918.3-201ENST00000533272 382 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 RPL21P12-201ENST00000559810 515 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 MYL12BP1-201ENST00000569826 507 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHB3P54753 MIR4775-201ENST00000581168 75 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 MIR3936-201ENST00000584304 110 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AC068790.3-201ENST00000602988 553 ntBASIC4.78□□□□□ -1.64
EPHB3P54753 AC133104.2-201ENST00000615272 193 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms