Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 MIR369-201ENST00000362155 70 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 SNORD46.1-201ENST00000364139 104 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 RNU1-59P-201ENST00000364829 162 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 SNORD116-29-201ENST00000384516 83 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 HSPE1P8-201ENST00000406997 288 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 VDAC1P9-201ENST00000412766 841 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AL356387.2-201ENST00000422272 243 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC106872.2-201ENST00000494303 480 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC008526.1-201ENST00000509149 338 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 MIR5692A1-201ENST00000580523 69 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 HMGB2P1-201ENST00000591146 634 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC022893.3-201ENST00000607665 437 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 ATP5A1P2-202ENST00000616464 443 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC010378.1-201ENST00000619270 362 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC015967.1-201ENST00000619893 476 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 AC068769.1-201ENST00000474767 2426 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 MTND5P10-201ENST00000603719 1809 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 MTCO1P12-201ENST00000414273 1543 ntBASIC5.69□□□□□ -1.5
TMEM88BA6NKF7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RNU6-562P-201ENST00000362731 107 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 MIR606-201ENST00000384851 96 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 SNORA16.2-201ENST00000390991 127 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AL590704.1-201ENST00000402856 794 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AL391417.1-201ENST00000404100 426 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RNA5SP317-201ENST00000410176 116 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RNU6-628P-201ENST00000410675 107 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RNA5SP311-201ENST00000411290 116 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RPS12P23-201ENST00000419579 400 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RPS29P17-201ENST00000430795 166 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 MTND1P17-201ENST00000448961 204 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RPL7P43-201ENST00000478876 753 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AC105137.1-201ENST00000484355 562 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RNU2-69P-201ENST00000516061 100 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RNA5SP315-201ENST00000516340 116 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RNA5SP312-201ENST00000517068 116 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 RNU1-45P-201ENST00000517191 141 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 TRMT10BP1-201ENST00000519377 943 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AC008489.1-201ENST00000524271 483 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AL163153.1-201ENST00000554223 283 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 MTCO3P23-201ENST00000561363 289 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 AL139124.1-201ENST00000609123 421 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 Z95114.1-201ENST00000624264 14574 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 SALL4P2-201ENST00000423288 2910 ntBASIC5.68□□□□□ -1.5
TMEM88BA6NKF7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 MAPK10-338ENST00000641647 3362 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 RNU5A-1-201ENST00000362698 116 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 RNU6-601P-201ENST00000384540 107 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AL139039.1-201ENST00000401900 692 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms