Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RPS29P12-201ENST00000460178 152 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.95□□□□□ -1.94
HDAC3O15379 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HDAC3O15379 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC3O15379 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.95□□□□□ -1.94
HDAC3O15379 RNU6-488P-201ENST00000515918 99 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 Y_RNA.688-201ENST00000516565 95 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC3O15379 AP001189.2-201ENST00000527320 189 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC3O15379 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.95□□□□□ -1.94
HDAC3O15379 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC3O15379 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC3O15379 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.95□□□□□ -1.94
HDAC3O15379 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC3O15379 MIR4444-1-201ENST00000581696 74 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 MIR4444-2-201ENST00000584390 74 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.95□□□□□ -1.94
HDAC3O15379 AL031281.1-201ENST00000604049 488 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 Z94722.1-201ENST00000604328 474 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 AL022161.1-201ENST00000604390 213 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 AC080013.6-201ENST00000606185 215 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.95□□□□□ -1.94
HDAC3O15379 AL392048.1-201ENST00000613946 534 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 AC098679.5-201ENST00000624394 571 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 AP003399.1-201ENST00000637534 361 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 MIR622-201ENST00000638396 96 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HDAC3O15379 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDAC3O15379 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDAC3O15379 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HDAC3O15379 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDAC3O15379 SNORA71.3-201ENST00000362582 128 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 RNU6-251P-201ENST00000363235 104 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDAC3O15379 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
HDAC3O15379 RNA5SP171-201ENST00000391071 115 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDAC3O15379 RPL19P1-201ENST00000411635 428 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 YPEL5P1-201ENST00000419731 367 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC3O15379 AL593851.1-201ENST00000426171 157 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.94□□□□□ -1.94
HDAC3O15379 AL050321.1-201ENST00000432363 400 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.94□□□□□ -1.94
HDAC3O15379 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.94□□□□□ -1.94
HDAC3O15379 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HDAC3O15379 MTCO2P25-201ENST00000447065 681 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.94□□□□□ -1.94
HDAC3O15379 AL034418.1-201ENST00000448675 860 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.94□□□□□ -1.94
HDAC3O15379 RPL7P18-201ENST00000478965 734 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.94□□□□□ -1.94
HDAC3O15379 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.94□□□□□ -1.94
HDAC3O15379 AC098799.2-201ENST00000509466 868 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 RNU6-1261P-201ENST00000517194 104 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC3O15379 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.94□□□□□ -1.94
HDAC3O15379 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.94□□□□□ -1.94
HDAC3O15379 AC008015.1-201ENST00000555505 465 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.94□□□□□ -1.94
HDAC3O15379 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.94□□□□□ -1.94
HDAC3O15379 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC3O15379 AP005136.1-201ENST00000579765 429 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC022069.1-201ENST00000582910 658 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC3O15379 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.94□□□□□ -1.94
HDAC3O15379 VN1R90P-201ENST00000595717 726 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AL390838.2-201ENST00000602394 274 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC103881.1-201ENST00000603476 538 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AL009028.1-201ENST00000604895 802 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC245008.1-201ENST00000608123 476 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC008083.4-201ENST00000615076 444 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.94□□□□□ -1.94
HDAC3O15379 AC099506.2-201ENST00000623074 221 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AL512506.2-201ENST00000624472 458 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC026634.1-201ENST00000634369 198 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HDAC3O15379 AC099654.7-201ENST00000635788 2127 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 AC103706.2-201ENST00000638080 240 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.94□□□□□ -1.94
HDAC3O15379 AL049781.1-201ENST00000623195 3585 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 SGO1P2-201ENST00000429458 1589 ntBASIC2.94□□□□□ -1.94
HDAC3O15379 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HDAC3O15379 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
HDAC3O15379 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HDAC3O15379 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC3O15379 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.93□□□□□ -1.94
HDAC3O15379 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC3O15379 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC3O15379 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HDAC3O15379 AC233263.6-201ENST00000631132 1963 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HDAC3O15379 RNA5SP139-201ENST00000364340 117 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 RNU1-109P-201ENST00000383960 147 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 MIR490-201ENST00000384865 128 ntBASIC2.93□□□□□ -1.94
HDAC3O15379 MIR449B-201ENST00000384995 97 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms