Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TMEM88BA6NKF7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
TMEM88BA6NKF7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
TMEM88BA6NKF7 AC004925.1-201ENST00000624256 2706 ntBASIC5.71□□□□□ -1.49
TMEM88BA6NKF7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 RN7SKP44-201ENST00000363602 316 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 SNORD42.2-201ENST00000365570 69 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 SNORD116-11-201ENST00000383882 92 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 Y_RNA.445-201ENST00000384168 102 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 RNU1-13P-201ENST00000384499 162 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 MIR124-3-201ENST00000384866 87 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 MTND2P23-201ENST00000422990 651 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AL591212.2-201ENST00000433923 257 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 H3F3BP1-201ENST00000440551 403 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 RPL21P93-201ENST00000480465 489 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 MTND5P5-201ENST00000503764 376 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 SNORA14.1-201ENST00000516113 141 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 CYCSP27-201ENST00000527643 293 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC090115.3-201ENST00000553218 849 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC012182.1-201ENST00000570133 895 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 MIR3672-201ENST00000584290 82 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC025857.2-201ENST00000602711 238 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 XIAPP1-201ENST00000603162 600 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 ATP1B3P1-201ENST00000605365 821 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC007619.2-201ENST00000605743 379 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC004696.1-201ENST00000614345 607 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 MIR6715B-201ENST00000637172 77 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 AC008013.2-202ENST00000637965 364 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TMEM88BA6NKF7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AC010300.1-201ENST00000600671 5134 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 Y_RNA.187-201ENST00000363918 113 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 RNU6-715P-201ENST00000365204 103 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 RNA5SP372-201ENST00000390836 115 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AC097374.1-203ENST00000400783 485 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 TBCAP2-201ENST00000416175 326 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 HSFY6P-201ENST00000445573 403 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AC090804.1-201ENST00000448870 490 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 RNU7-152P-201ENST00000458982 64 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 Y_RNA.653-201ENST00000459091 95 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 RN7SL132P-201ENST00000478131 296 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 RPL31P60-201ENST00000478450 367 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 MLLT10P2-201ENST00000506434 249 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 RANP9-201ENST00000519957 271 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 COPS8P3-201ENST00000526024 482 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AL355836.1-201ENST00000555951 870 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AC006270.2-201ENST00000578523 652 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 MIR3944-201ENST00000581277 108 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AL080274.1-201ENST00000605565 220 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AC091979.2-201ENST00000607514 214 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AL359757.2-201ENST00000624309 274 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 AC015813.6-201ENST00000624409 5808 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 SNX18P3-202ENST00000565670 1750 ntBASIC5.7□□□□□ -1.5
TMEM88BA6NKF7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms