Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HDAC3O15379 AC138915.1-201ENST00000565427 1685 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HDAC3O15379 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HDAC3O15379 AP000526.1-201ENST00000603308 1388 ntBASIC2.97□□□□□ -1.93
HDAC3O15379 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HDAC3O15379 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HDAC3O15379 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.96□□□□□ -1.93
HDAC3O15379 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC3O15379 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC3O15379 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC3O15379 RNU6-1066P-201ENST00000363573 105 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 RNA5SP50-201ENST00000363731 107 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 RNU1-85P-201ENST00000364127 164 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 RNU6-621P-201ENST00000364752 109 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.96□□□□□ -1.94
HDAC3O15379 CD24P4-201ENST00000382840 243 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 RNU6-921P-201ENST00000384361 107 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 SNORD15B-201ENST00000384714 146 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HDAC3O15379 AL450338.1-201ENST00000407987 512 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 RN7SKP220-201ENST00000410611 288 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 RPS29P4-201ENST00000414733 161 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.96□□□□□ -1.94
HDAC3O15379 USP9YP26-201ENST00000421008 661 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.96□□□□□ -1.94
HDAC3O15379 AL389915.1-201ENST00000422463 466 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC233981.1-201ENST00000423224 461 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.96□□□□□ -1.94
HDAC3O15379 AL390023.1-201ENST00000428836 262 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC005345.1-201ENST00000431868 217 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 HMGN2P31-201ENST00000432430 273 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.96□□□□□ -1.94
HDAC3O15379 AC005019.1-201ENST00000436455 431 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.96□□□□□ -1.94
HDAC3O15379 Z96811.1-201ENST00000445880 108 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 VN1R34P-201ENST00000447387 883 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC104978.1-201ENST00000449387 391 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.96□□□□□ -1.94
HDAC3O15379 ANKRD26P4-201ENST00000455755 950 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 OR6K1P-201ENST00000456766 971 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 PNPLA4P1-201ENST00000458328 305 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.96□□□□□ -1.94
HDAC3O15379 RPL21P41-201ENST00000459863 264 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.96□□□□□ -1.94
HDAC3O15379 HMGB1P25-201ENST00000468402 607 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC010285.1-201ENST00000470580 392 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 RN7SL601P-201ENST00000471221 293 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 BET1P1-201ENST00000482276 359 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.96□□□□□ -1.94
HDAC3O15379 WBP1LP4-201ENST00000505043 344 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 HSPD1P15-201ENST00000505573 1122 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC010486.3-201ENST00000511602 785 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HDAC3O15379 RN7SKP96-201ENST00000516948 297 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC3O15379 AC022690.1-201ENST00000526681 550 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.96□□□□□ -1.94
HDAC3O15379 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC3O15379 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC3O15379 MTCYBP27-201ENST00000555160 670 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC093519.1-201ENST00000566109 298 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 SNORD39.3-201ENST00000584451 71 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC040904.1-201ENST00000590850 223 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.96□□□□□ -1.94
HDAC3O15379 RPL23AP78-201ENST00000599928 470 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC018638.7-201ENST00000605836 1114 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC091946.2-201ENST00000606105 291 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 MIR92B-201ENST00000607575 96 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
HDAC3O15379 AC138932.5-201ENST00000617759 563 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC3O15379 MTND5P31-201ENST00000419366 1374 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 AC092447.7-201ENST00000422212 1621 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC3O15379 AC010733.2-201ENST00000589496 5702 ntBASIC2.96□□□□□ -1.94
HDAC3O15379 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HDAC3O15379 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
HDAC3O15379 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HDAC3O15379 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
HDAC3O15379 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.95□□□□□ -1.94
HDAC3O15379 AC073325.2-201ENST00000339545 159 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HDAC3O15379 RNU6-492P-201ENST00000363035 104 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 RNU1-33P-201ENST00000364249 162 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 SNORA7.4-201ENST00000384249 137 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HDAC3O15379 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC3O15379 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.95□□□□□ -1.94
HDAC3O15379 AL451074.5-201ENST00000415894 435 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 RPL21P32-201ENST00000419877 477 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 MTCO3P1-205ENST00000422088 832 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.95□□□□□ -1.94
HDAC3O15379 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.95□□□□□ -1.94
HDAC3O15379 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC3O15379 AL445567.1-201ENST00000439121 144 ntBASIC2.95□□□□□ -1.94
HDAC3O15379 CYCSP35-201ENST00000451978 304 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms