Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 AC138761.3-201ENST00000579993 334 ntBASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 AC022726.1-201ENST00000587475 207 ntBASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 AC019206.1-201ENST00000621938 425 ntBASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 MTND4LP32-201ENST00000636111 270 ntBASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TMEM88BA6NKF7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 BCORP1-203ENST00000513194 5093 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AC092681.1-201ENST00000297369 291 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 CISD1P1-201ENST00000393907 327 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AL360182.1-201ENST00000397433 468 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 RNU6-370P-201ENST00000411008 104 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 H2AFZP5-201ENST00000446960 382 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 Y_RNA.639-201ENST00000458981 102 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 RN7SL542P-201ENST00000467147 294 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 DYNLL1P5-201ENST00000467158 270 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 HMGN1P10-201ENST00000474557 553 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AC012158.1-204ENST00000483430 465 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AC090096.1-201ENST00000489168 390 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 HMGB3P15-201ENST00000507326 574 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 IMMP1LP2-201ENST00000552954 492 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AC020661.2-201ENST00000560114 134 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AC019322.1-201ENST00000571869 389 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AL023881.1-201ENST00000621088 301 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 MTND5P42-201ENST00000637720 498 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 AC025031.4-201ENST00000621248 3271 ntBASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.73□□□□□ -1.49
TMEM88BA6NKF7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 Z73965.1-201ENST00000623412 2297 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 RNU6-593P-201ENST00000364716 112 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 GNG5P2-201ENST00000372054 207 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 RNU6-128P-201ENST00000383976 107 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 Y_RNA.482-201ENST00000384377 111 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 MIR554-201ENST00000384874 96 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AL121834.1-202ENST00000404494 277 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 RPLP0P7-201ENST00000416050 667 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 FABP5P14-201ENST00000437273 393 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AP001086.1-201ENST00000494882 321 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 MIR3171-201ENST00000584270 74 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 IPO5P1-202ENST00000600039 287 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AL360085.1-201ENST00000604713 532 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 AP005019.3-201ENST00000620418 560 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 SDAD1P2-201ENST00000441308 2028 ntBASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.72□□□□□ -1.49
TMEM88BA6NKF7 PRO1804-201ENST00000623780 2050 ntBASIC5.71□□□□□ -1.49
TMEM88BA6NKF7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TMEM88BA6NKF7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 271.2 ms