Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MIR1302-3-201ENST00000408128 138 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 RNU4-25P-201ENST00000410569 230 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 RN7SKP247-201ENST00000411094 308 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 RNU6-603P-201ENST00000411403 107 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 RPS12P24-201ENST00000412619 387 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 AL133384.1-201ENST00000412744 351 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 CHIAP3-201ENST00000423668 1133 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 MTCYBP10-201ENST00000424905 650 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 PPIAP13-201ENST00000434706 478 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.85□□□□□ -1.63
EPHB3P54753 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.85□□□□□ -1.63
EPHB3P54753 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.85□□□□□ -1.63
EPHB3P54753 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.85□□□□□ -1.63
EPHB3P54753 AL138799.3-201ENST00000438968 350 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 TXNP6-201ENST00000510190 310 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.85□□□□□ -1.63
EPHB3P54753 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 Y_RNA.682-201ENST00000516457 100 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 RN7SKP295-201ENST00000517264 153 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 AP005435.4-201ENST00000529514 284 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.85□□□□□ -1.63
EPHB3P54753 AC136624.4-201ENST00000573044 370 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 CYCSP40-201ENST00000575927 294 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 MIR4424-201ENST00000585257 86 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 GLUD1P4-201ENST00000590914 418 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 MIR6830-201ENST00000636015 70 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.85□□□□□ -1.63
EPHB3P54753 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
EPHB3P54753 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
EPHB3P54753 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EPHB3P54753 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.84□□□□□ -1.63
EPHB3P54753 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
EPHB3P54753 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EPHB3P54753 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EPHB3P54753 AL031119.1-201ENST00000404707 1879 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.84□□□□□ -1.63
EPHB3P54753 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
EPHB3P54753 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.84□□□□□ -1.63
EPHB3P54753 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EPHB3P54753 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EPHB3P54753 RNU4-66P-201ENST00000365199 138 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 Y_RNA.373-201ENST00000365600 103 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 MIR454-201ENST00000390180 115 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AC074085.1-201ENST00000413598 418 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.84□□□□□ -1.63
EPHB3P54753 ARL5AP1-201ENST00000418991 388 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AL356387.2-201ENST00000422272 243 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AC092832.1-201ENST00000422934 400 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 FTH1P2-201ENST00000466086 412 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AC011276.1-201ENST00000469688 323 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AF213884.1-201ENST00000488102 463 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 MTCYBP40-201ENST00000509390 1135 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AC021146.1-201ENST00000511202 716 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.84□□□□□ -1.63
EPHB3P54753 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.84□□□□□ -1.63
EPHB3P54753 TOMM20P2-201ENST00000540082 421 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.84□□□□□ -1.63
EPHB3P54753 AL161670.1-201ENST00000554348 137 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AC008269.2-201ENST00000561915 1105 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.84□□□□□ -1.63
EPHB3P54753 AC018552.3-201ENST00000567416 561 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.84□□□□□ -1.63
EPHB3P54753 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.84□□□□□ -1.63
EPHB3P54753 Z69720.2-201ENST00000624755 279 ntBASIC4.84□□□□□ -1.63
EPHB3P54753 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
EPHB3P54753 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EPHB3P54753 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
EPHB3P54753 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.84□□□□□ -1.64
EPHB3P54753 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHB3P54753 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHB3P54753 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHB3P54753 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
EPHB3P54753 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.83□□□□□ -1.64
EPHB3P54753 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHB3P54753 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHB3P54753 Y_RNA.135-201ENST00000363439 95 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 RNU6-1188P-201ENST00000363795 107 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 SNORA51.6-201ENST00000384151 125 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 RNU6-1304P-201ENST00000411374 106 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 RPL37P10-201ENST00000412884 288 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 RPL7AP25-201ENST00000423357 805 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 EIF4HP2-201ENST00000424380 563 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHB3P54753 RPL7L1P10-201ENST00000427790 463 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 OR4K11P-201ENST00000431829 904 ntBASIC4.83□□□□□ -1.64
EPHB3P54753 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.83□□□□□ -1.64
EPHB3P54753 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 280.3 ms