Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC243772.1-201ENST00000451620 410 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 RN7SL184P-201ENST00000488308 297 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 RPL7P51-201ENST00000490532 749 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.41□□□□□ -1.54
NFKB1P19838 SNORA40.14-201ENST00000516543 86 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.41□□□□□ -1.54
NFKB1P19838 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.41□□□□□ -1.54
NFKB1P19838 AL358913.1-201ENST00000554342 121 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.41□□□□□ -1.54
NFKB1P19838 SULT1C2P2-201ENST00000562517 294 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.41□□□□□ -1.54
NFKB1P19838 MIR4310-201ENST00000582950 57 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 HMGN2P28-201ENST00000606102 262 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 AL512329.2-201ENST00000607350 548 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 AC103858.2-201ENST00000621471 543 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 MIR4272-201ENST00000635924 64 ntBASIC5.41□□□□□ -1.54
NFKB1P19838 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.41□□□□□ -1.54
NFKB1P19838 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.41□□□□□ -1.54
NFKB1P19838 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NFKB1P19838 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NFKB1P19838 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
NFKB1P19838 AL138820.1-201ENST00000617901 5305 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NFKB1P19838 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
NFKB1P19838 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.4□□□□□ -1.54
NFKB1P19838 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NFKB1P19838 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NFKB1P19838 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.4□□□□□ -1.54
NFKB1P19838 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NFKB1P19838 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NFKB1P19838 Y_RNA.222-201ENST00000364264 102 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 Y_RNA.314-201ENST00000365114 102 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NFKB1P19838 Y_RNA.562-201ENST00000384695 113 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 RNU6-33P-201ENST00000384793 107 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 RNA5SP339-201ENST00000390987 122 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 RNU11-4P-201ENST00000391149 133 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.4□□□□□ -1.54
NFKB1P19838 CYCSP6-201ENST00000434498 302 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.4□□□□□ -1.54
NFKB1P19838 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.4□□□□□ -1.54
NFKB1P19838 AC008481.1-201ENST00000463278 396 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 AC084198.1-201ENST00000477747 402 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 RPS24P16-201ENST00000497294 392 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.4□□□□□ -1.54
NFKB1P19838 RNU6-789P-201ENST00000517105 102 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.4□□□□□ -1.54
NFKB1P19838 RPL10P14-201ENST00000565265 298 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.4□□□□□ -1.54
NFKB1P19838 MTND4LP5-201ENST00000605152 292 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 MIR6839-201ENST00000620425 113 ntBASIC5.4□□□□□ -1.54
NFKB1P19838 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.4□□□□□ -1.55
NFKB1P19838 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.4□□□□□ -1.55
NFKB1P19838 AL034549.2-201ENST00000618285 3373 ntBASIC5.4□□□□□ -1.55
NFKB1P19838 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
NFKB1P19838 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.4□□□□□ -1.55
NFKB1P19838 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NFKB1P19838 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
NFKB1P19838 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NFKB1P19838 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NFKB1P19838 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.39□□□□□ -1.55
NFKB1P19838 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NFKB1P19838 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NFKB1P19838 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NFKB1P19838 SNORA20.1-201ENST00000364790 130 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 RN7SKP81-201ENST00000365603 331 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
NFKB1P19838 MIR105-1-201ENST00000385222 81 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 RNU4-65P-201ENST00000410473 140 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 GNG5P5-201ENST00000420444 220 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.39□□□□□ -1.55
NFKB1P19838 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NFKB1P19838 RPL23AP33-201ENST00000442301 452 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AL590664.1-201ENST00000448065 339 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.39□□□□□ -1.55
NFKB1P19838 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.39□□□□□ -1.55
NFKB1P19838 RN7SL814P-201ENST00000487715 300 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AC022133.1-201ENST00000490961 571 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 RN7SL447P-201ENST00000494711 245 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AC105758.1-201ENST00000506038 399 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.39□□□□□ -1.55
NFKB1P19838 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.39□□□□□ -1.55
NFKB1P19838 RNU6-941P-201ENST00000516346 108 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 RNA5SP373-201ENST00000517271 95 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.39□□□□□ -1.55
NFKB1P19838 IGKV3D-34-201ENST00000522638 302 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AC007991.1-201ENST00000522680 631 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AC040926.1-201ENST00000530195 238 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.39□□□□□ -1.55
NFKB1P19838 AC126177.5-201ENST00000549599 178 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.39□□□□□ -1.55
NFKB1P19838 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.39□□□□□ -1.55
NFKB1P19838 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.39□□□□□ -1.55
NFKB1P19838 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NFKB1P19838 MIR5188-201ENST00000583467 113 ntBASIC5.39□□□□□ -1.55
NFKB1P19838 AC011626.1-201ENST00000604710 562 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 292.8 ms