Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 EIF5A2P1-201ENST00000564027 460 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 MIR5186-201ENST00000577504 120 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AC022662.1-201ENST00000580252 331 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AC008088.1-201ENST00000580993 280 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 AC013444.2-201ENST00000603317 787 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AP003973.1-201ENST00000604639 691 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.04□□□□□ -1.92
HDAC3O15379 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.04□□□□□ -1.92
HDAC3O15379 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 AP002907.1-201ENST00000606361 1430 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.03□□□□□ -1.92
HDAC3O15379 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 OR1S2-201ENST00000302592 978 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HDAC3O15379 RNU5D-1-201ENST00000363299 116 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 RNU6-1027P-201ENST00000383998 107 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 SNORA48.7-201ENST00000391302 135 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 ATP5F1P3-201ENST00000397213 657 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 PTMAP2-201ENST00000397627 327 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC110754.1-201ENST00000399740 601 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 RNA5SP492-201ENST00000411330 114 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 BX323014.1-201ENST00000412876 237 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AL136133.1-201ENST00000413694 376 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 FCF1P2-201ENST00000415284 583 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 LUZP4P1-201ENST00000415420 344 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 HSFY4P-201ENST00000415994 1181 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 SAR1AP4-201ENST00000429225 591 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC109583.1-201ENST00000432156 268 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 RPL37P1-201ENST00000432310 284 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 SEPT7P5-201ENST00000434048 306 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC108734.1-201ENST00000439549 399 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 Z99714.1-201ENST00000450463 807 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 RFC5P1-201ENST00000454419 874 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.03□□□□□ -1.92
HDAC3O15379 snoU13.24-201ENST00000458998 104 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 HMGB1P22-201ENST00000505315 124 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC010486.2-201ENST00000505572 483 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 AC021146.8-201ENST00000507455 733 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HDAC3O15379 MTCYBP16-201ENST00000509187 1129 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.03□□□□□ -1.92
HDAC3O15379 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 AC007834.2-201ENST00000536310 343 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 SETP2-201ENST00000553886 926 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 RPL21P12-201ENST00000559810 515 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.03□□□□□ -1.92
HDAC3O15379 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.03□□□□□ -1.92
HDAC3O15379 AC009220.3-201ENST00000604318 586 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC021749.1-201ENST00000604322 607 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 TUSC7.1-201ENST00000610969 165 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AL359535.1-201ENST00000612100 1087 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.03□□□□□ -1.92
HDAC3O15379 AP002782.1-201ENST00000623107 614 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 AC084035.1-201ENST00000634543 607 ntBASIC3.03□□□□□ -1.92
HDAC3O15379 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
HDAC3O15379 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HDAC3O15379 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDAC3O15379 AP003122.5-201ENST00000527668 3766 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 FAM133CP-201ENST00000332869 704 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 OR5H2-201ENST00000355273 945 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HDAC3O15379 Y_RNA.169-201ENST00000363745 96 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 SNORA14A-201ENST00000364773 135 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 SNORD116-2-201ENST00000384274 95 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 Y_RNA.465-201ENST00000384293 102 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 SNORD116-6-201ENST00000384711 96 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.02□□□□□ -1.93
HDAC3O15379 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.02□□□□□ -1.93
HDAC3O15379 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.02□□□□□ -1.93
HDAC3O15379 DPRXP1-201ENST00000426312 460 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 RPP40P1-201ENST00000426762 456 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.02□□□□□ -1.93
HDAC3O15379 MTND1P32-201ENST00000433043 938 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AC010881.1-201ENST00000433830 235 ntBASIC3.02□□□□□ -1.93
HDAC3O15379 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 233.8 ms