Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC090453.1-201ENST00000495560 436 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC025164.1-201ENST00000496249 478 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.93□□□□□ -1.62
EPHB3P54753 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
EPHB3P54753 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 SNORD27.1-201ENST00000516319 72 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 SCARNA24.1-201ENST00000516465 137 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.93□□□□□ -1.62
EPHB3P54753 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.93□□□□□ -1.62
EPHB3P54753 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.93□□□□□ -1.62
EPHB3P54753 AC026951.1-201ENST00000559530 2459 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 AL669831.4-202ENST00000590817 238 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC008687.2-201ENST00000597865 520 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC123786.2-201ENST00000603459 275 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC004908.2-201ENST00000609090 574 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 AP005019.3-201ENST00000620418 560 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AC244517.12-201ENST00000623581 663 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 AL359757.2-201ENST00000624309 274 ntBASIC4.93□□□□□ -1.62
EPHB3P54753 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.93□□□□□ -1.62
EPHB3P54753 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.93□□□□□ -1.62
EPHB3P54753 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
EPHB3P54753 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.93□□□□□ -1.62
EPHB3P54753 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
EPHB3P54753 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHB3P54753 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
EPHB3P54753 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.93□□□□□ -1.62
EPHB3P54753 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
EPHB3P54753 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.93□□□□□ -1.62
EPHB3P54753 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
EPHB3P54753 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.92□□□□□ -1.62
EPHB3P54753 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
EPHB3P54753 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.92□□□□□ -1.62
EPHB3P54753 OR1S2-201ENST00000302592 978 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 Y_RNA.112-201ENST00000363250 102 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 RNA5SP447-201ENST00000363749 119 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 RNU6-853P-201ENST00000364306 107 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 U3.12-201ENST00000364498 214 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 RNU6-444P-201ENST00000383988 108 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 RNU6-308P-201ENST00000390957 107 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
EPHB3P54753 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
EPHB3P54753 AC114482.1-201ENST00000418010 247 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AC008280.1-201ENST00000418851 412 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.92□□□□□ -1.62
EPHB3P54753 AC006548.1-201ENST00000427470 102 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.92□□□□□ -1.62
EPHB3P54753 CBX3P6-201ENST00000430257 527 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.92□□□□□ -1.62
EPHB3P54753 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.92□□□□□ -1.62
EPHB3P54753 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.92□□□□□ -1.62
EPHB3P54753 AC010301.1-201ENST00000473936 355 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AC026979.1-201ENST00000492525 396 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 RPL36AP41-201ENST00000493820 306 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 HSPD1P15-201ENST00000505573 1122 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.92□□□□□ -1.62
EPHB3P54753 AC093303.1-201ENST00000514549 295 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 SMURF2P1-201ENST00000514992 481 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 RNA5SP337-201ENST00000517007 109 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 RNU6-1137P-201ENST00000517073 99 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 RPL7P20-201ENST00000520308 745 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
EPHB3P54753 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
EPHB3P54753 ZNF705CP-201ENST00000530515 889 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AP001781.1-201ENST00000530977 207 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AC005868.1-201ENST00000536421 331 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.92□□□□□ -1.62
EPHB3P54753 LSM3P2-201ENST00000551246 273 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.92□□□□□ -1.62
EPHB3P54753 AL353997.4-201ENST00000586196 166 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.92□□□□□ -1.62
EPHB3P54753 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.92□□□□□ -1.62
EPHB3P54753 AC007938.3-201ENST00000604965 623 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 AC083809.1-201ENST00000615051 472 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 CR381572.1-201ENST00000625098 102 ntBASIC4.92□□□□□ -1.62
EPHB3P54753 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
EPHB3P54753 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.92□□□□□ -1.62
EPHB3P54753 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
EPHB3P54753 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.92□□□□□ -1.62
EPHB3P54753 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
EPHB3P54753 AC107068.1-201ENST00000563286 4218 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
EPHB3P54753 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.91□□□□□ -1.62
EPHB3P54753 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
EPHB3P54753 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
EPHB3P54753 OR14L1P-202ENST00000641545 3009 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 RNU4-48P-201ENST00000365559 182 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 RNU6-1106P-201ENST00000390845 107 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 U3.22-201ENST00000391120 215 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 AL031679.1-201ENST00000400616 525 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 ELOCP19-201ENST00000411919 318 ntBASIC4.91□□□□□ -1.62
EPHB3P54753 RPEP3-201ENST00000425462 676 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms