Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC090695.1-201ENST00000561269 1222 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC012321.1-201ENST00000561622 1588 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.06□□□□□ -1.92
HDAC3O15379 AC005412.1-201ENST00000580812 1049 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.06□□□□□ -1.92
HDAC3O15379 AC109315.1-201ENST00000584143 1347 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
HDAC3O15379 DUXAP3-201ENST00000603616 594 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC069545.1-201ENST00000605671 358 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.06□□□□□ -1.92
HDAC3O15379 AC097478.2-201ENST00000610572 514 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC006133.1-201ENST00000617106 264 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC004777.1-201ENST00000624317 287 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC012442.3-202ENST00000636742 206 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HDAC3O15379 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HDAC3O15379 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.06□□□□□ -1.92
HDAC3O15379 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.05□□□□□ -1.92
HDAC3O15379 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HDAC3O15379 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.05□□□□□ -1.92
HDAC3O15379 HMGB1P5-201ENST00000255320 642 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 RNU6-582P-201ENST00000362989 107 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 SNORD113-6-201ENST00000363345 75 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.05□□□□□ -1.92
HDAC3O15379 RNU6-1293P-201ENST00000384077 107 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 SNORD116-23-201ENST00000384645 92 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 PRRC2CP1-201ENST00000404428 159 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 RNA5SP80-201ENST00000410475 111 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 RNA5SP274-201ENST00000410484 108 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 BMS1P22-201ENST00000414726 313 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.05□□□□□ -1.92
HDAC3O15379 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.05□□□□□ -1.92
HDAC3O15379 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.05□□□□□ -1.92
HDAC3O15379 HSPD1P21-201ENST00000436541 245 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.05□□□□□ -1.92
HDAC3O15379 AC007327.1-201ENST00000447461 264 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 RPL23AP20-201ENST00000447965 421 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.05□□□□□ -1.92
HDAC3O15379 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.05□□□□□ -1.92
HDAC3O15379 AC034244.1-201ENST00000507687 207 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 SNORA31.1-201ENST00000515993 133 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 SNORA31.5-201ENST00000516190 133 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.05□□□□□ -1.92
HDAC3O15379 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.05□□□□□ -1.92
HDAC3O15379 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
HDAC3O15379 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.05□□□□□ -1.92
HDAC3O15379 MIR3158-1-201ENST00000583596 81 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 BNIP3P24-201ENST00000593398 557 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 AC021171.1-201ENST00000603137 706 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 AC245389.1-201ENST00000605141 529 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 AC004696.1-201ENST00000614345 607 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HDAC3O15379 AC091304.6-201ENST00000619761 202 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 RNU6-156P-201ENST00000621869 107 ntBASIC3.05□□□□□ -1.92
HDAC3O15379 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HDAC3O15379 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HDAC3O15379 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
HDAC3O15379 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDAC3O15379 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.04□□□□□ -1.92
HDAC3O15379 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDAC3O15379 ZNF37BP-203ENST00000452306 1352 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HDAC3O15379 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HDAC3O15379 SNORA51.12-201ENST00000384448 134 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 RNY3P9-201ENST00000384727 106 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 MIR218-2-201ENST00000385006 110 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AC119751.3-201ENST00000399720 670 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 RSL24D1P4-201ENST00000400938 484 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 MIR887-201ENST00000401258 79 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.04□□□□□ -1.92
HDAC3O15379 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 TOMM22P1-201ENST00000418578 312 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.04□□□□□ -1.92
HDAC3O15379 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HDAC3O15379 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 MTCYBP37-201ENST00000510642 1133 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 SNORA67.7-201ENST00000516664 135 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 RNA5SP135-201ENST00000517019 125 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.04□□□□□ -1.92
HDAC3O15379 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 OR5B10P-201ENST00000532869 642 ntBASIC3.04□□□□□ -1.92
HDAC3O15379 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.04□□□□□ -1.92
HDAC3O15379 DNAJC8P1-201ENST00000554535 372 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 798.1 ms