Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC073657.2-201ENST00000605661 303 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AC131902.3-201ENST00000611767 581 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AC093783.1-201ENST00000612976 329 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 AC105227.2-201ENST00000615075 605 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.08□□□□□ -1.92
HDAC3O15379 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.08□□□□□ -1.92
HDAC3O15379 AL157770.1-201ENST00000623049 439 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 CR392039.5-201ENST00000623201 510 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 AL122126.1-201ENST00000546905 1318 ntBASIC3.08□□□□□ -1.92
HDAC3O15379 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HDAC3O15379 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HDAC3O15379 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HDAC3O15379 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HDAC3O15379 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HDAC3O15379 Y_RNA.192-201ENST00000363977 102 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 SNORA62.3-201ENST00000365110 153 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 OR52E6-202ENST00000379946 954 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 RNU6-1151P-201ENST00000384684 107 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 RPL31P1-201ENST00000398116 372 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 HMGN1P24-201ENST00000412282 298 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC107081.1-201ENST00000414975 361 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 MRPL50P2-201ENST00000416821 482 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 HMGB1P49-201ENST00000418882 569 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC009237.2-201ENST00000421358 284 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 Z93242.1-201ENST00000427102 353 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC093151.1-201ENST00000427711 313 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 YWHAZP8-201ENST00000436935 731 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 COX7BP2-201ENST00000437976 242 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.07□□□□□ -1.92
HDAC3O15379 AC093155.1-201ENST00000440164 826 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC004865.1-201ENST00000442276 1003 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 Z95327.1-201ENST00000446082 482 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.07□□□□□ -1.92
HDAC3O15379 RPS24P6-201ENST00000452670 400 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC104472.2-201ENST00000469035 601 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.07□□□□□ -1.92
HDAC3O15379 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.07□□□□□ -1.92
HDAC3O15379 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.07□□□□□ -1.92
HDAC3O15379 AC048346.1-201ENST00000510247 144 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 HIGD1AP3-201ENST00000515857 278 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 TRMT10BP1-201ENST00000519377 943 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 HIGD1AP6-201ENST00000521833 279 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 AC023050.2-201ENST00000544968 387 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 MIR3912-201ENST00000577566 105 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 AC080013.3-201ENST00000606839 578 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC023158.2-201ENST00000614876 543 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HDAC3O15379 AC022509.4-201ENST00000621404 572 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC034229.5-201ENST00000624258 185 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 AC244258.1-201ENST00000637553 1071 ntBASIC3.07□□□□□ -1.92
HDAC3O15379 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HDAC3O15379 Z83843.1-201ENST00000604070 3685 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 RNU6-1214P-201ENST00000363650 109 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 RNU4-40P-201ENST00000364351 143 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HDAC3O15379 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HDAC3O15379 AL139098.1-201ENST00000407291 389 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 RN7SKP27-201ENST00000410684 333 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 RNU6-272P-201ENST00000411028 104 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 RAB9AP3-201ENST00000412737 573 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AL161449.1-201ENST00000414531 1199 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC007435.1-201ENST00000421086 415 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 USP9YP36-201ENST00000424581 829 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC005517.2-201ENST00000424673 553 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.06□□□□□ -1.92
HDAC3O15379 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HDAC3O15379 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.06□□□□□ -1.92
HDAC3O15379 MTND2P22-201ENST00000444325 1033 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AL133547.1-201ENST00000448546 220 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 RAB9AP1-201ENST00000449393 573 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 RPL23AP15-201ENST00000450202 459 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 RPL26P28-201ENST00000451325 435 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.06□□□□□ -1.92
HDAC3O15379 SYPL1P1-201ENST00000473622 768 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC004263.1-201ENST00000479327 332 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC126121.1-201ENST00000482313 553 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.06□□□□□ -1.92
HDAC3O15379 AC021678.1-201ENST00000505195 936 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.06□□□□□ -1.92
HDAC3O15379 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.06□□□□□ -1.92
HDAC3O15379 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.06□□□□□ -1.92
HDAC3O15379 AC104986.1-201ENST00000517978 436 ntBASIC3.06□□□□□ -1.92
HDAC3O15379 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.06□□□□□ -1.92
HDAC3O15379 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.06□□□□□ -1.92
HDAC3O15379 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.06□□□□□ -1.92
HDAC3O15379 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.06□□□□□ -1.92
HDAC3O15379 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms