Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.15□□□□□ -1.91
HDAC3O15379 SDCBPP3-201ENST00000419629 891 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.15□□□□□ -1.91
HDAC3O15379 AL445584.1-201ENST00000431451 330 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 SETP8-201ENST00000435341 628 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.15□□□□□ -1.91
HDAC3O15379 MTCYBP11-201ENST00000447254 1109 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AC233982.1-201ENST00000451247 436 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 MRPL42P4-201ENST00000453267 443 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 USP9YP25-201ENST00000457708 443 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 RN7SL542P-201ENST00000467147 294 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC084024.2-201ENST00000503480 791 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.15□□□□□ -1.91
HDAC3O15379 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HDAC3O15379 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.15□□□□□ -1.91
HDAC3O15379 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC006130.2-201ENST00000586202 326 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AP001542.2-201ENST00000593141 364 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.15□□□□□ -1.91
HDAC3O15379 AC008751.2-201ENST00000597885 980 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.15□□□□□ -1.91
HDAC3O15379 IGHV3-29-201ENST00000604817 344 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 Z99129.2-201ENST00000619967 314 ntBASIC3.15□□□□□ -1.91
HDAC3O15379 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.14□□□□□ -1.91
HDAC3O15379 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC3O15379 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.14□□□□□ -1.91
HDAC3O15379 snoZ40.1-201ENST00000364540 72 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 RNU6-619P-201ENST00000365146 108 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 MIR16-1-201ENST00000385271 89 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.14□□□□□ -1.91
HDAC3O15379 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 ELOCP9-201ENST00000418624 239 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 ATG3P1-201ENST00000419507 911 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 PAICSP7-201ENST00000419829 962 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC3O15379 MTCO2P20-201ENST00000437339 673 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC3O15379 COX6CP18-201ENST00000448769 222 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC3O15379 AC069528.1-202ENST00000482888 637 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC3O15379 AC119751.5-201ENST00000514077 770 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AC023632.4-201ENST00000517783 191 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AC008562.1-201ENST00000521763 330 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC3O15379 MTATP6P15-201ENST00000527233 835 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC3O15379 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.14□□□□□ -1.91
HDAC3O15379 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.14□□□□□ -1.91
HDAC3O15379 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.14□□□□□ -1.91
HDAC3O15379 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC3O15379 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.14□□□□□ -1.91
HDAC3O15379 MTND4P33-201ENST00000556706 766 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AC034105.4-201ENST00000568304 277 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.14□□□□□ -1.91
HDAC3O15379 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.14□□□□□ -1.91
HDAC3O15379 BDH2P1-201ENST00000602288 736 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AL592148.2-201ENST00000612210 372 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AC024257.5-201ENST00000612739 531 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AC021755.4-201ENST00000616620 456 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 AC068831.7-201ENST00000616954 363 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 MTND2P41-201ENST00000637599 773 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 ZNF663P-202ENST00000641770 1131 ntBASIC3.14□□□□□ -1.91
HDAC3O15379 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HDAC3O15379 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.14□□□□□ -1.91
HDAC3O15379 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC3O15379 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HDAC3O15379 AC025263.3-201ENST00000622965 1396 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.13□□□□□ -1.91
HDAC3O15379 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HDAC3O15379 RNU4-28P-201ENST00000364739 141 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.13□□□□□ -1.91
HDAC3O15379 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HDAC3O15379 MIR554-201ENST00000384874 96 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 SNORA26.7-201ENST00000391288 122 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 ERHP2-201ENST00000402323 299 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.13□□□□□ -1.91
HDAC3O15379 Z75741.2-201ENST00000417272 1167 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.13□□□□□ -1.91
HDAC3O15379 RPL7P34-201ENST00000433316 712 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 RPL21P110-201ENST00000433345 446 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AC084290.1-201ENST00000434995 374 ntBASIC3.13□□□□□ -1.91
HDAC3O15379 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.13□□□□□ -1.91
HDAC3O15379 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.13□□□□□ -1.91
HDAC3O15379 RAB11AP1-201ENST00000442978 646 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms