Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CEACAMP6-201ENST00000452007 574 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AC002553.2-201ENST00000453217 340 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.03□□□□□ -1.6
EPHB3P54753 AL356010.1-201ENST00000456364 102 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 MTND4P17-201ENST00000470444 350 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 RPL31P50-201ENST00000471002 296 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 RPS4XP18-201ENST00000495480 763 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 AC010587.1-201ENST00000505809 469 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 HMGB3P15-201ENST00000507326 574 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AC091868.1-201ENST00000508746 304 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 RNU6-559P-201ENST00000516151 98 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 RN7SKP256-201ENST00000517201 314 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 RNU6-709P-201ENST00000517257 104 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AC090572.1-201ENST00000519251 160 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 AC040958.1-201ENST00000561102 201 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AC026464.5-201ENST00000562497 722 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
EPHB3P54753 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 POLR3GP2-201ENST00000588366 668 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 uc_338.9-201ENST00000617424 182 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 AC002525.1-201ENST00000624392 1622 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
EPHB3P54753 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 AL049780.3-201ENST00000624612 1583 ntBASIC5.03□□□□□ -1.6
EPHB3P54753 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EPHB3P54753 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
EPHB3P54753 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.03□□□□□ -1.6
EPHB3P54753 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
EPHB3P54753 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
EPHB3P54753 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.02□□□□□ -1.61
EPHB3P54753 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
EPHB3P54753 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
EPHB3P54753 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
EPHB3P54753 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
EPHB3P54753 STX3-208ENST00000641815 3236 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
EPHB3P54753 RN7SKP267-201ENST00000410381 285 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC079809.1-201ENST00000415468 276 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.02□□□□□ -1.61
EPHB3P54753 AC127526.1-201ENST00000417526 366 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC048351.1-201ENST00000420064 602 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.02□□□□□ -1.61
EPHB3P54753 AL451054.2-201ENST00000420896 202 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 HSPE1P1-201ENST00000421494 318 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.02□□□□□ -1.61
EPHB3P54753 DUTP6-201ENST00000425573 462 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.02□□□□□ -1.61
EPHB3P54753 AC016712.1-201ENST00000431088 378 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.02□□□□□ -1.61
EPHB3P54753 FHP1-201ENST00000442741 703 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 FAM103A2P-201ENST00000444122 354 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
EPHB3P54753 RPL37P3-201ENST00000456825 293 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 PPP1R2P5-201ENST00000457256 603 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC007547.1-201ENST00000462177 490 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.02□□□□□ -1.61
EPHB3P54753 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.02□□□□□ -1.61
EPHB3P54753 AC068587.1-201ENST00000483613 781 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.02□□□□□ -1.61
EPHB3P54753 UBA52P3-201ENST00000491303 382 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 TMEM251P1-201ENST00000503717 318 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.02□□□□□ -1.61
EPHB3P54753 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.02□□□□□ -1.61
EPHB3P54753 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.02□□□□□ -1.61
EPHB3P54753 AC022616.3-201ENST00000523940 148 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.02□□□□□ -1.61
EPHB3P54753 AC123904.2-201ENST00000548059 300 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.02□□□□□ -1.61
EPHB3P54753 AC110588.1-201ENST00000559699 137 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 MIR3118-1-201ENST00000581787 76 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.02□□□□□ -1.61
EPHB3P54753 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
EPHB3P54753 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.02□□□□□ -1.61
EPHB3P54753 OR10AB1P-201ENST00000609613 938 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC087588.2-201ENST00000617667 426 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AL354950.2-201ENST00000617939 290 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 AC009237.17-201ENST00000618111 748 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.02□□□□□ -1.61
EPHB3P54753 CDRT1-208ENST00000630868 794 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
EPHB3P54753 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
EPHB3P54753 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms