Protein–RNA interactions for Protein: A0A087WSH0

1700031M16Rik, RIKEN cDNA 1700031M16 gene, mousemouse

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700031M16RikA0A087WSH0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
1700031M16RikA0A087WSH0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
1700031M16RikA0A087WSH0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
1700031M16RikA0A087WSH0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
1700031M16RikA0A087WSH0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm27357-201ENSMUST00000183754 135 ntBASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm28033-201ENSMUST00000184224 96 ntBASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
1700031M16RikA0A087WSH0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm18669-201ENSMUST00000216049 778 ntBASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
1700031M16RikA0A087WSH0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Gm36967-201ENSMUST00000193814 266 ntBASIC17.22■□□□□ 0.35
1700031M16RikA0A087WSH0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms