Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 AC004832.5-201ENST00000608677 401 ntBASIC2.56□□□□□ -2
SOD1P00441 AL359198.2-201ENST00000611836 194 ntBASIC2.56□□□□□ -2
SOD1P00441 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
SOD1P00441 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.56□□□□□ -2
SOD1P00441 AC243829.7-201ENST00000633081 225 ntBASIC2.56□□□□□ -2
SOD1P00441 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.56□□□□□ -2
SOD1P00441 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.55□□□□□ -2
SOD1P00441 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SOD1P00441 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.55□□□□□ -2
SOD1P00441 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.55□□□□□ -2
SOD1P00441 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.55□□□□□ -2
SOD1P00441 DPPA2P1-201ENST00000428060 556 ntBASIC2.55□□□□□ -2
SOD1P00441 RPL7P29-201ENST00000437151 728 ntBASIC2.55□□□□□ -2
SOD1P00441 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.55□□□□□ -2
SOD1P00441 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.55□□□□□ -2
SOD1P00441 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
SOD1P00441 RNA5SP148-201ENST00000516527 94 ntBASIC2.55□□□□□ -2
SOD1P00441 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.55□□□□□ -2
SOD1P00441 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.55□□□□□ -2
SOD1P00441 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.55□□□□□ -2
SOD1P00441 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.55□□□□□ -2
SOD1P00441 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.55□□□□□ -2
SOD1P00441 FAM35CP-201ENST00000554755 2470 ntBASIC2.55□□□□□ -2
SOD1P00441 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
SOD1P00441 CBX3P2-202ENST00000583365 535 ntBASIC2.55□□□□□ -2
SOD1P00441 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.55□□□□□ -2
SOD1P00441 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.55□□□□□ -2
SOD1P00441 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.55□□□□□ -2
SOD1P00441 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SOD1P00441 MTND5P3-201ENST00000438536 1800 ntBASIC2.54□□□□□ -2
SOD1P00441 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
SOD1P00441 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.54□□□□□ -2
SOD1P00441 AL672167.1-206ENST00000356293 943 ntBASIC2.54□□□□□ -2
SOD1P00441 SNORA27.3-201ENST00000364937 134 ntBASIC2.54□□□□□ -2
SOD1P00441 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.54□□□□□ -2
SOD1P00441 MIR518C-201ENST00000384822 101 ntBASIC2.54□□□□□ -2
SOD1P00441 AL356057.1-202ENST00000402263 756 ntBASIC2.54□□□□□ -2
SOD1P00441 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.54□□□□□ -2
SOD1P00441 MTATP6P31-201ENST00000406985 692 ntBASIC2.54□□□□□ -2
SOD1P00441 RNA5SP80-201ENST00000410475 111 ntBASIC2.54□□□□□ -2
SOD1P00441 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.54□□□□□ -2
SOD1P00441 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.54□□□□□ -2
SOD1P00441 AC009963.1-201ENST00000417265 157 ntBASIC2.54□□□□□ -2
SOD1P00441 LINC01347-201ENST00000417964 355 ntBASIC2.54□□□□□ -2
SOD1P00441 USP9YP20-201ENST00000419224 558 ntBASIC2.54□□□□□ -2
SOD1P00441 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.54□□□□□ -2
SOD1P00441 CKS1BP5-201ENST00000434172 273 ntBASIC2.54□□□□□ -2
SOD1P00441 HMGB1P45-201ENST00000435986 653 ntBASIC2.54□□□□□ -2
SOD1P00441 NPM1P13-201ENST00000452663 865 ntBASIC2.54□□□□□ -2
SOD1P00441 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.54□□□□□ -2
SOD1P00441 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.54□□□□□ -2
SOD1P00441 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.54□□□□□ -2
SOD1P00441 MTND4LP22-201ENST00000508209 276 ntBASIC2.54□□□□□ -2
SOD1P00441 AC093755.1-201ENST00000512950 1023 ntBASIC2.54□□□□□ -2
SOD1P00441 SNORA31.13-201ENST00000516624 135 ntBASIC2.54□□□□□ -2
SOD1P00441 RNU6-826P-201ENST00000516827 104 ntBASIC2.54□□□□□ -2
SOD1P00441 HMGB1P46-201ENST00000520062 610 ntBASIC2.54□□□□□ -2
SOD1P00441 MTND2P26-201ENST00000528255 1029 ntBASIC2.54□□□□□ -2
SOD1P00441 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.54□□□□□ -2
SOD1P00441 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.54□□□□□ -2
SOD1P00441 CENPUP2-201ENST00000555897 1186 ntBASIC2.54□□□□□ -2
SOD1P00441 AC090751.1-201ENST00000566966 267 ntBASIC2.54□□□□□ -2
SOD1P00441 AC010735.1-201ENST00000567305 1026 ntBASIC2.54□□□□□ -2
SOD1P00441 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.54□□□□□ -2
SOD1P00441 AC034268.2-201ENST00000571784 482 ntBASIC2.54□□□□□ -2
SOD1P00441 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.54□□□□□ -2
SOD1P00441 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.54□□□□□ -2
SOD1P00441 HMGN2P28-201ENST00000606102 262 ntBASIC2.54□□□□□ -2
SOD1P00441 CR589904.2-201ENST00000612533 440 ntBASIC2.54□□□□□ -2
SOD1P00441 AC005156.1-201ENST00000613371 573 ntBASIC2.54□□□□□ -2
SOD1P00441 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.54□□□□□ -2
SOD1P00441 AC011978.2-201ENST00000569835 2054 ntBASIC2.54□□□□□ -2
SOD1P00441 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.54□□□□□ -2
SOD1P00441 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SOD1P00441 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
SOD1P00441 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SOD1P00441 AC009487.2-201ENST00000420969 6821 ntBASIC2.54□□□□□ -2
SOD1P00441 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.53□□□□□ -2
SOD1P00441 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.53□□□□□ -2
SOD1P00441 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
SOD1P00441 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SOD1P00441 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.53□□□□□ -2
SOD1P00441 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SOD1P00441 MIR449A-201ENST00000362113 91 ntBASIC2.53□□□□□ -2
SOD1P00441 RNU1-100P-201ENST00000365255 165 ntBASIC2.53□□□□□ -2
SOD1P00441 XGY1-201ENST00000381172 446 ntBASIC2.53□□□□□ -2
SOD1P00441 RNU6-1293P-201ENST00000384077 107 ntBASIC2.53□□□□□ -2
SOD1P00441 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
SOD1P00441 RPS20P25-201ENST00000412447 352 ntBASIC2.53□□□□□ -2
SOD1P00441 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.53□□□□□ -2
SOD1P00441 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.53□□□□□ -2
SOD1P00441 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.53□□□□□ -2
SOD1P00441 RPL23AP74-201ENST00000437246 471 ntBASIC2.53□□□□□ -2
SOD1P00441 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.53□□□□□ -2
SOD1P00441 RPL7P59-201ENST00000447700 943 ntBASIC2.53□□□□□ -2
SOD1P00441 AC008571.1-201ENST00000467232 300 ntBASIC2.53□□□□□ -2
SOD1P00441 AC104687.1-201ENST00000485829 412 ntBASIC2.53□□□□□ -2
SOD1P00441 RPL23AP55-201ENST00000498163 452 ntBASIC2.53□□□□□ -2
SOD1P00441 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.53□□□□□ -2
SOD1P00441 RPL23AP94-201ENST00000512518 302 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms