Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC3O15379 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC3O15379 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC3O15379 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC3O15379 MTND4LP31-201ENST00000514859 294 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 RN7SKP13-201ENST00000515933 244 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 RNU6-1073P-201ENST00000517182 106 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 IGKV2-36-201ENST00000519999 223 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 HMGB1P1-201ENST00000522557 636 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC3O15379 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.2□□□□□ -1.9
HDAC3O15379 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HDAC3O15379 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC3O15379 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC3O15379 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC3O15379 AC012182.1-201ENST00000570133 895 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 MTND3P13-201ENST00000574391 343 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC3O15379 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC3O15379 VN1R83P-201ENST00000595685 445 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.2□□□□□ -1.9
HDAC3O15379 AC022022.2-201ENST00000602989 360 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AL451086.1-201ENST00000605596 223 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AL583856.2-201ENST00000606298 543 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AP000238.1-201ENST00000608759 426 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC3O15379 AC009464.1-201ENST00000615731 469 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AL161637.1-201ENST00000622380 412 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AC091903.1-201ENST00000624322 454 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AC120349.3-201ENST00000624377 529 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AC092608.3-201ENST00000625017 386 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC3O15379 MTCO1P6-201ENST00000481192 1384 ntBASIC3.2□□□□□ -1.9
HDAC3O15379 AL365440.1-201ENST00000436135 2167 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 MTND4P31-201ENST00000425607 1343 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC3O15379 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC3O15379 AC099786.3-201ENST00000565735 1410 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC3O15379 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC3O15379 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HDAC3O15379 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC3O15379 OR1L1-202ENST00000373686 1083 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC3O15379 MTND4P13-201ENST00000402078 1023 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 MIR1250-201ENST00000408098 113 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 RNU4-65P-201ENST00000410473 140 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 HIGD1AP15-201ENST00000416198 280 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AL356320.2-201ENST00000417263 507 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 RPL7P10-201ENST00000417407 739 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HDAC3O15379 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC3O15379 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 AC122718.1-201ENST00000439448 744 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 ATP5C1P1-201ENST00000441945 895 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AL592437.1-201ENST00000443781 492 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC3O15379 MRPL35P4-201ENST00000453682 566 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC3O15379 NAP1L1P3-201ENST00000462291 880 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 MTCO2P6-201ENST00000463134 685 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 FAM133DP-201ENST00000464802 691 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC079203.1-201ENST00000487972 404 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC3O15379 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC3O15379 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC3O15379 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 AC239860.2-201ENST00000525886 270 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC3O15379 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.19□□□□□ -1.9
HDAC3O15379 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC3O15379 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 AC090751.1-201ENST00000566966 267 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC3O15379 AL020997.3-201ENST00000602843 359 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC002487.1-201ENST00000604565 994 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC107952.2-201ENST00000606048 486 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC092354.2-201ENST00000607786 514 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC092106.3-201ENST00000611308 722 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AL138478.1-201ENST00000612252 832 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 VN1R74P-201ENST00000613259 503 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HDAC3O15379 U73479.1-201ENST00000618062 168 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC022079.1-201ENST00000621546 602 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC011330.2-201ENST00000621680 635 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AC090617.7-201ENST00000623952 126 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 CU459211.1-201ENST00000635667 749 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 AL392088.2-201ENST00000637607 285 ntBASIC3.19□□□□□ -1.9
HDAC3O15379 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC3O15379 MTND5P24-201ENST00000438892 1767 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 323.6 ms