Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC013410.1-201ENST00000436223 1232 ntBASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 HMGB3P12-201ENST00000438745 556 ntBASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC090525.1-201ENST00000479116 478 ntBASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC114967.1-201ENST00000504890 259 ntBASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 OR6R2P-201ENST00000609216 300 ntBASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 RMST_8.1-201ENST00000610287 165 ntBASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC074140.1-201ENST00000621617 208 ntBASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.76□□□□□ -1.81
SHANK3Q9BYB0 RHEBP3-201ENST00000411920 351 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 MTCO1P39-201ENST00000426148 480 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 RNU6-1334P-201ENST00000516032 105 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 SNORD53-201ENST00000579969 78 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 Z82195.1-201ENST00000604558 398 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 AC078899.5-201ENST00000612475 178 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 AL354950.1-201ENST00000614150 568 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 ELL2P4-201ENST00000446870 1376 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 AL162389.1-201ENST00000449233 177 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 AC027176.1-201ENST00000560204 514 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 AC010680.4-201ENST00000605334 543 ntBASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.75□□□□□ -1.81
SHANK3Q9BYB0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 FAR1P1-201ENST00000427163 934 ntBASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 VWA8P1-201ENST00000510889 176 ntBASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 AC018797.3-201ENST00000513388 1241 ntBASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 AC016727.1-205ENST00000605437 569 ntBASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.74□□□□□ -1.81
SHANK3Q9BYB0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 VTA1P1-201ENST00000414044 866 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 MRPL50P2-201ENST00000416821 482 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC091544.1-201ENST00000484702 348 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 SNORA31.21-201ENST00000517180 77 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC107016.2-201ENST00000547968 190 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AL442163.2-201ENST00000553912 710 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC046143.2-201ENST00000609789 160 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 MIR196B-201ENST00000384852 84 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AL009174.1-201ENST00000426577 416 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 UBE2D3P1-201ENST00000436669 444 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC007954.1-201ENST00000554198 494 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 AC105036.1-201ENST00000566222 271 ntBASIC3.73□□□□□ -1.81
SHANK3Q9BYB0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AL049555.1-201ENST00000562834 1933 ntBASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AC124916.1-201ENST00000444020 547 ntBASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AP000936.2-201ENST00000447151 681 ntBASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AC114982.2-201ENST00000461396 358 ntBASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 RPS27AP9-201ENST00000477681 438 ntBASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 SRIP1-201ENST00000489235 288 ntBASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AC104027.1-201ENST00000521887 300 ntBASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AL137072.1-201ENST00000603444 466 ntBASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
SHANK3Q9BYB0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms