Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL353193.1-201ENST00000421444 268 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 GTF2IP20-201ENST00000431663 360 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AL365400.1-201ENST00000431854 640 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC112204.1-201ENST00000502591 103 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 POU5F1P7-201ENST00000508759 541 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 RNU6-583P-201ENST00000516012 92 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 RNU2-46P-201ENST00000517038 113 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC243972.3-201ENST00000539655 198 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.33□□□□□ -1.56
EPHB3P54753 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC007687.1-201ENST00000602704 304 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AC124312.5-201ENST00000604451 268 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AL355802.3-201ENST00000607571 545 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.33□□□□□ -1.56
EPHB3P54753 AC040896.1-201ENST00000613819 479 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 MIR6839-201ENST00000620425 113 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 MIR1302-1-201ENST00000637932 143 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
EPHB3P54753 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.33□□□□□ -1.56
EPHB3P54753 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EPHB3P54753 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
EPHB3P54753 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EPHB3P54753 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EPHB3P54753 MTCO1P9-201ENST00000505577 1534 ntBASIC5.33□□□□□ -1.56
EPHB3P54753 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
EPHB3P54753 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.32□□□□□ -1.56
EPHB3P54753 AC012618.3-205ENST00000637896 1496 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
EPHB3P54753 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.32□□□□□ -1.56
EPHB3P54753 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.32□□□□□ -1.56
EPHB3P54753 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 Y_RNA.67-201ENST00000362870 100 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 Y_RNA.132-201ENST00000363421 102 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 RNU6-666P-201ENST00000363499 107 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 Y_RNA.216-201ENST00000364205 93 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 SNORD115.1-201ENST00000391109 76 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 VN1R8P-201ENST00000407739 893 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.32□□□□□ -1.56
EPHB3P54753 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.32□□□□□ -1.56
EPHB3P54753 ISCA1P6-201ENST00000427740 390 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC133104.1-201ENST00000429100 218 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC009238.2-201ENST00000431026 355 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.32□□□□□ -1.56
EPHB3P54753 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 AL935212.3-201ENST00000450729 284 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC091180.1-201ENST00000462104 372 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC021660.1-201ENST00000465006 554 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC098799.3-201ENST00000506095 438 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.32□□□□□ -1.56
EPHB3P54753 AC097486.1-201ENST00000515331 210 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 TRMT10BP1-201ENST00000519377 943 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC027309.2-201ENST00000520566 192 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.32□□□□□ -1.56
EPHB3P54753 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.32□□□□□ -1.56
EPHB3P54753 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHB3P54753 MIR4675-201ENST00000577898 77 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 MIR548Y-201ENST00000582739 110 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC006504.6-201ENST00000590142 199 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.32□□□□□ -1.56
EPHB3P54753 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.32□□□□□ -1.56
EPHB3P54753 AP005432.2-201ENST00000608162 586 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.32□□□□□ -1.56
EPHB3P54753 AL158196.1-201ENST00000616786 434 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.32□□□□□ -1.56
EPHB3P54753 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
EPHB3P54753 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
EPHB3P54753 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms