Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SAR1AP4-201ENST00000429225 591 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AL358934.1-201ENST00000432346 324 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHB3P54753 RPL37P21-201ENST00000435890 276 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 RPL7P29-201ENST00000437151 728 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 AC091685.2-201ENST00000454924 864 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHB3P54753 FAM172BP-201ENST00000487497 1089 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHB3P54753 AC006427.1-201ENST00000514359 712 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 HMGN1P9-201ENST00000515212 298 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHB3P54753 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHB3P54753 AP002812.4-201ENST00000532139 286 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHB3P54753 AC090515.3-201ENST00000560431 315 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.47□□□□□ -1.53
EPHB3P54753 AC007151.1-201ENST00000572774 483 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AC009977.1-201ENST00000586015 570 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 AC091488.1-201ENST00000604239 660 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHB3P54753 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHB3P54753 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHB3P54753 INTS6P1-201ENST00000504674 2530 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 CCT4P2-201ENST00000233836 1548 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHB3P54753 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 OR4G11P-202ENST00000642116 1414 ntBASIC5.47□□□□□ -1.53
EPHB3P54753 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHB3P54753 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
EPHB3P54753 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
EPHB3P54753 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
EPHB3P54753 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
EPHB3P54753 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.46□□□□□ -1.53
EPHB3P54753 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
EPHB3P54753 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
EPHB3P54753 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
EPHB3P54753 Y_RNA.1-201ENST00000352915 104 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 RNU6-462P-201ENST00000362659 105 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 RN7SKP185-201ENST00000362813 326 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 RNA5SP455-201ENST00000365190 119 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 MT-TP-201ENST00000387461 68 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
EPHB3P54753 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC104297.1-201ENST00000393779 870 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 RPS3AP36-201ENST00000398190 775 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AL590806.1-201ENST00000415818 853 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AL133482.1-201ENST00000415988 498 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC004690.1-201ENST00000418216 328 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC062016.2-201ENST00000420950 676 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 SDCBPP1-201ENST00000440192 890 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.46□□□□□ -1.54
EPHB3P54753 YWHAQP9-201ENST00000445891 512 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 GAPDHP17-201ENST00000449858 1001 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 RN7SL189P-201ENST00000468631 289 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 RPS24P16-201ENST00000497294 392 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC114981.1-201ENST00000503897 678 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AF131216.2-201ENST00000512316 564 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 RNA5SP216-201ENST00000516111 123 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.46□□□□□ -1.54
EPHB3P54753 AP001189.2-201ENST00000527320 189 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AP001284.1-201ENST00000528393 2118 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 BRD9P1-201ENST00000529855 560 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC093027.1-201ENST00000546698 429 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC007424.1-203ENST00000554613 687 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 EDDM3DP-201ENST00000554692 434 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC112187.2-201ENST00000604345 283 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 COX6CP4-201ENST00000605798 228 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.46□□□□□ -1.54
EPHB3P54753 AC104010.1-201ENST00000616889 150 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC006504.8-201ENST00000621046 635 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.46□□□□□ -1.54
EPHB3P54753 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
EPHB3P54753 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
EPHB3P54753 FARSBP1-201ENST00000435808 1778 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC138907.8-201ENST00000623981 2256 ntBASIC5.46□□□□□ -1.54
EPHB3P54753 AC140134.1-201ENST00000511830 3544 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms