Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Uspl1Q3ULM6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Uspl1Q3ULM6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.28■■□□□ 1
Uspl1Q3ULM6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.28■■□□□ 1
Uspl1Q3ULM6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.28■■□□□ 1
Uspl1Q3ULM6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 CT009713.7-201ENSMUST00000224689 571 ntBASIC21.27■■□□□ 1
Uspl1Q3ULM6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Uspl1Q3ULM6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Uspl1Q3ULM6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Uspl1Q3ULM6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Uspl1Q3ULM6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Uspl1Q3ULM6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Uspl1Q3ULM6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Gm7284-201ENSMUST00000131667 944 ntBASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Uspl1Q3ULM6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Uspl1Q3ULM6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Uspl1Q3ULM6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Uspl1Q3ULM6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms