Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm13884-201ENSMUST00000118103 829 ntBASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm28659-201ENSMUST00000188013 759 ntBASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm5864-201ENSMUST00000202263 970 ntBASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Mir8098-201ENSMUST00000184011 137 ntBASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.42■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm13216-201ENSMUST00000117145 591 ntBASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-39A0A0G2JDV4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm25745-201ENSMUST00000174945 133 ntBASIC16.4■□□□□ 0.22
Igkv5-39A0A0G2JDV4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms