Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 Y_RNA.676-201ENST00000516393 96 ntBASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 MIR7851-201ENST00000610611 160 ntBASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 AC024341.1-201ENST00000526444 1552 ntBASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 AL132656.3-201ENST00000606384 1595 ntBASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 SRIP2-201ENST00000428470 166 ntBASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 HMGB3P9-201ENST00000441799 583 ntBASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 AC112198.1-201ENST00000505369 1220 ntBASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 AL390334.1-201ENST00000556395 450 ntBASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 DPRXP4-201ENST00000578053 568 ntBASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 AC027290.2-201ENST00000623210 18662 ntBASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 MUC2-202ENST00000613187 4845 ntBASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHANK3Q9BYB0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 RNU6-304P-201ENST00000364855 107 ntBASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 RPS20P1-201ENST00000434853 354 ntBASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 AF228730.2-201ENST00000438784 848 ntBASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 RPS29P31-201ENST00000446147 164 ntBASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 AC092868.3-201ENST00000560515 784 ntBASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 AC103881.1-201ENST00000603476 538 ntBASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 AC093732.2-201ENST00000607950 274 ntBASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 ATP5A1P2-202ENST00000616464 443 ntBASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SHANK3Q9BYB0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 RPL5P18-201ENST00000406671 891 ntBASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 AL139413.1-201ENST00000421309 217 ntBASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 AC005002.1-201ENST00000447458 540 ntBASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 RPL5P30-201ENST00000465511 891 ntBASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 NPM1P17-201ENST00000479221 602 ntBASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 AC112503.1-201ENST00000608436 391 ntBASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 FAM35BP-202ENST00000497389 3337 ntBASIC4.46□□□□□ -1.7
SHANK3Q9BYB0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 RPL23AP69-201ENST00000431134 458 ntBASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 FDX1P2-201ENST00000450769 375 ntBASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 HMGB3P22-202ENST00000451823 572 ntBASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 OR2AS2P-201ENST00000606902 342 ntBASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.45□□□□□ -1.7
SHANK3Q9BYB0 OR51C1P-202ENST00000641159 1444 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 RN7SKP199-201ENST00000410325 305 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 OR1AA1P-201ENST00000419597 916 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 NPM1P39-201ENST00000449818 867 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 CCDC75P1-201ENST00000469247 791 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 RN7SL594P-201ENST00000470590 287 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 AC005798.1-201ENST00000513715 387 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 IGHV3-63-201ENST00000518422 341 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 AC018442.3-201ENST00000523025 183 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 SULT1C2P2-201ENST00000562517 294 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 AL356489.2-201ENST00000566968 3528 ntBASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHANK3Q9BYB0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms