Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL121839.2-201ENST00000565058 6943 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 HSPE1P27-201ENST00000430808 296 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC097262.1-201ENST00000452559 548 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 FCF1P8-201ENST00000510322 597 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC113192.3-201ENST00000529152 742 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC006539.2-201ENST00000601729 572 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 MRPS35P3-201ENST00000603189 709 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AC073657.2-201ENST00000605661 303 ntBASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.52□□□□□ -1.69
SHANK3Q9BYB0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 RNU6-7-201ENST00000364784 107 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 RNU6-8-201ENST00000365467 107 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 RNA5SP229-201ENST00000410809 99 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 AL158071.1-201ENST00000430315 461 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 ATP5HP2-201ENST00000433885 485 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 YWHAQP9-201ENST00000445891 512 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 AL669942.2-201ENST00000620352 697 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 AL031595.2-201ENST00000624215 19071 ntBASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHANK3Q9BYB0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 GSTA8P-201ENST00000404253 637 ntBASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 RSL24D1P1-201ENST00000404972 493 ntBASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 YWHAEP4-201ENST00000505390 198 ntBASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 snoU109.6-201ENST00000516831 118 ntBASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 AL078595.2-201ENST00000605309 1780 ntBASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SHANK3Q9BYB0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 AL136131.1-201ENST00000406079 803 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 BX890604.2-201ENST00000427883 474 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 FTH1P1-201ENST00000437933 532 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 SEPT14P1-201ENST00000458703 648 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 TCP11X3P-202ENST00000514289 1254 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 AC008489.1-201ENST00000524271 483 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 AL360157.1-201ENST00000565962 87 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 MIR3162-201ENST00000581818 82 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 RNU1-70P-201ENST00000362618 164 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 RNU1-18P-201ENST00000363062 164 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 RN7SKP222-201ENST00000410651 315 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 EIF5A2P1-201ENST00000564027 460 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 EIF1P6-201ENST00000600054 334 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 AL596275.2-204ENST00000641628 552 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 AL596275.2-206ENST00000641957 626 ntBASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHANK3Q9BYB0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 RNU1-140P-201ENST00000365040 165 ntBASIC4.48□□□□□ -1.69
SHANK3Q9BYB0 RPL7P48-201ENST00000461513 746 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms