Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smco4Q9JIS3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smco4Q9JIS3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.35□□□□□ -0.27
Smco4Q9JIS3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smco4Q9JIS3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco4Q9JIS3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smco4Q9JIS3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smco4Q9JIS3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Smco4Q9JIS3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smco4Q9JIS3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Smco4Q9JIS3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.33□□□□□ -0.28
Smco4Q9JIS3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms