Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mre11Q61216 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.87■□□□□ 0.77
Mre11Q61216 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Mre11Q61216 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Mre11Q61216 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Mre11Q61216 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.86■□□□□ 0.77
Mre11Q61216 Flg-201ENSMUST00000050758 1488 ntBASIC19.86■□□□□ 0.77
Mre11Q61216 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Mre11Q61216 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.86■□□□□ 0.77
Mre11Q61216 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Mre11Q61216 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Mre11Q61216 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Mre11Q61216 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.85■□□□□ 0.77
Mre11Q61216 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.85■□□□□ 0.77
Mre11Q61216 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Mre11Q61216 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Mre11Q61216 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Mre11Q61216 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC19.85■□□□□ 0.77
Mre11Q61216 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Mre11Q61216 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.85■□□□□ 0.77
Mre11Q61216 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mre11Q61216 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Mre11Q61216 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.84■□□□□ 0.77
Mre11Q61216 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Mre11Q61216 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Mre11Q61216 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.84■□□□□ 0.77
Mre11Q61216 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Mre11Q61216 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mre11Q61216 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Mre11Q61216 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Mre11Q61216 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Mre11Q61216 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Mre11Q61216 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.83■□□□□ 0.77
Mre11Q61216 Gm42790-201ENSMUST00000201268 969 ntBASIC19.83■□□□□ 0.77
Mre11Q61216 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mre11Q61216 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mre11Q61216 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.83■□□□□ 0.76
Mre11Q61216 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mre11Q61216 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mre11Q61216 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mre11Q61216 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mre11Q61216 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Mre11Q61216 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.83■□□□□ 0.76
Mre11Q61216 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mre11Q61216 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Mre11Q61216 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.82■□□□□ 0.76
Mre11Q61216 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.82■□□□□ 0.76
Mre11Q61216 Gm6576-201ENSMUST00000169678 883 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms