Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Rtl1Q7M732 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Rtl1Q7M732 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC29.58■■■□□ 2.33
Rtl1Q7M732 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Rtl1Q7M732 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Mir8098-201ENSMUST00000184011 137 ntBASIC29.57■■■□□ 2.32
Rtl1Q7M732 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rtl1Q7M732 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rtl1Q7M732 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rtl1Q7M732 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rtl1Q7M732 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
Rtl1Q7M732 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Rtl1Q7M732 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC29.56■■■□□ 2.32
Rtl1Q7M732 Gm27867-201ENSMUST00000184778 125 ntBASIC29.56■■■□□ 2.32
Rtl1Q7M732 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rtl1Q7M732 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC29.55■■■□□ 2.32
Rtl1Q7M732 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rtl1Q7M732 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rtl1Q7M732 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rtl1Q7M732 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rtl1Q7M732 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC29.55■■■□□ 2.32
Rtl1Q7M732 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC29.55■■■□□ 2.32
Rtl1Q7M732 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC29.55■■■□□ 2.32
Rtl1Q7M732 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rtl1Q7M732 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rtl1Q7M732 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtl1Q7M732 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Rtl1Q7M732 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtl1Q7M732 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtl1Q7M732 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtl1Q7M732 Gm15165-201ENSMUST00000118140 502 ntBASIC29.54■■■□□ 2.32
Rtl1Q7M732 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC29.54■■■□□ 2.32
Rtl1Q7M732 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC29.54■■■□□ 2.32
Rtl1Q7M732 Gm36967-201ENSMUST00000193814 266 ntBASIC29.54■■■□□ 2.32
Rtl1Q7M732 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtl1Q7M732 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC29.53■■■□□ 2.32
Rtl1Q7M732 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rtl1Q7M732 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Birc2-201ENSMUST00000054878 378 ntBASIC29.52■■■□□ 2.32
Rtl1Q7M732 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Rtl1Q7M732 Gm32996-201ENSMUST00000199828 1447 ntBASIC29.52■■■□□ 2.32
Rtl1Q7M732 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Rtl1Q7M732 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Rtl1Q7M732 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
Rtl1Q7M732 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC29.51■■■□□ 2.32
Rtl1Q7M732 Gm8349-201ENSMUST00000182720 1003 ntBASIC29.51■■■□□ 2.32
Rtl1Q7M732 Gm43347-201ENSMUST00000200226 580 ntBASIC29.51■■■□□ 2.32
Rtl1Q7M732 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC29.51■■■□□ 2.32
Rtl1Q7M732 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
Rtl1Q7M732 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC29.51■■■□□ 2.31
Rtl1Q7M732 Gm7507-201ENSMUST00000183053 1008 ntBASIC29.51■■■□□ 2.31
Rtl1Q7M732 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rtl1Q7M732 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
Rtl1Q7M732 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rtl1Q7M732 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rtl1Q7M732 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rtl1Q7M732 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms