Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cr1Q9Z0D9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cr1Q9Z0D9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cx3cr1Q9Z0D9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.86■□□□□ 0.77
Cx3cr1Q9Z0D9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cr1Q9Z0D9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cr1Q9Z0D9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cx3cr1Q9Z0D9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cx3cr1Q9Z0D9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cx3cr1Q9Z0D9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cx3cr1Q9Z0D9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cx3cr1Q9Z0D9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Gm24804-201ENSMUST00000174982 85 ntBASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cx3cr1Q9Z0D9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cr1Q9Z0D9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cx3cr1Q9Z0D9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cx3cr1Q9Z0D9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cx3cr1Q9Z0D9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.78■□□□□ 0.76
Cx3cr1Q9Z0D9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cx3cr1Q9Z0D9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cx3cr1Q9Z0D9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cr1Q9Z0D9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cx3cr1Q9Z0D9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.77■□□□□ 0.75
Cx3cr1Q9Z0D9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cx3cr1Q9Z0D9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cx3cr1Q9Z0D9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cx3cr1Q9Z0D9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cx3cr1Q9Z0D9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cx3cr1Q9Z0D9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Cx3cr1Q9Z0D9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cx3cr1Q9Z0D9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cr1Q9Z0D9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cx3cr1Q9Z0D9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cr1Q9Z0D9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cx3cr1Q9Z0D9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cx3cr1Q9Z0D9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cr1Q9Z0D9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cx3cr1Q9Z0D9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cx3cr1Q9Z0D9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cr1Q9Z0D9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cr1Q9Z0D9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cx3cr1Q9Z0D9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cr1Q9Z0D9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cr1Q9Z0D9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cr1Q9Z0D9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cr1Q9Z0D9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cx3cr1Q9Z0D9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.68■□□□□ 0.74
Cx3cr1Q9Z0D9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cr1Q9Z0D9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cr1Q9Z0D9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cx3cr1Q9Z0D9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cr1Q9Z0D9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cr1Q9Z0D9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cr1Q9Z0D9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cr1Q9Z0D9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.65■□□□□ 0.74
Cx3cr1Q9Z0D9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cr1Q9Z0D9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 127.6 ms