Protein–RNA interactions for Protein: Q9WUP1

Ramp3, Receptor activity-modifying protein 3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ramp3Q9WUP1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ramp3Q9WUP1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ramp3Q9WUP1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ramp3Q9WUP1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ramp3Q9WUP1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ramp3Q9WUP1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ramp3Q9WUP1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ramp3Q9WUP1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ramp3Q9WUP1 Gm6311-201ENSMUST00000073790 878 ntBASIC21.24■□□□□ 0.99
Ramp3Q9WUP1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Ramp3Q9WUP1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.23■□□□□ 0.99
Ramp3Q9WUP1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ramp3Q9WUP1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ramp3Q9WUP1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ramp3Q9WUP1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.21■□□□□ 0.99
Ramp3Q9WUP1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Ramp3Q9WUP1 Gm37136-201ENSMUST00000194368 194 ntBASIC21.2■□□□□ 0.98
Ramp3Q9WUP1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.2■□□□□ 0.98
Ramp3Q9WUP1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.19■□□□□ 0.98
Ramp3Q9WUP1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ramp3Q9WUP1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Ramp3Q9WUP1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ramp3Q9WUP1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ramp3Q9WUP1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Ramp3Q9WUP1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ramp3Q9WUP1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.18■□□□□ 0.98
Ramp3Q9WUP1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ramp3Q9WUP1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ramp3Q9WUP1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ramp3Q9WUP1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ramp3Q9WUP1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ramp3Q9WUP1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ramp3Q9WUP1 Mir6538-201ENSMUST00000183713 110 ntBASIC21.16■□□□□ 0.98
Ramp3Q9WUP1 Gm4799-201ENSMUST00000095396 657 ntBASIC21.16■□□□□ 0.98
Ramp3Q9WUP1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ramp3Q9WUP1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ramp3Q9WUP1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ramp3Q9WUP1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ramp3Q9WUP1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ramp3Q9WUP1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ramp3Q9WUP1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.14■□□□□ 0.97
Ramp3Q9WUP1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.14■□□□□ 0.97
Ramp3Q9WUP1 Gm11175-201ENSMUST00000116172 543 ntBASIC21.13■□□□□ 0.97
Ramp3Q9WUP1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.13■□□□□ 0.97
Ramp3Q9WUP1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ramp3Q9WUP1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ramp3Q9WUP1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ramp3Q9WUP1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ramp3Q9WUP1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ramp3Q9WUP1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ramp3Q9WUP1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ramp3Q9WUP1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ramp3Q9WUP1 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.11■□□□□ 0.97
Ramp3Q9WUP1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ramp3Q9WUP1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ramp3Q9WUP1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ramp3Q9WUP1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.1■□□□□ 0.97
Ramp3Q9WUP1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ramp3Q9WUP1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ramp3Q9WUP1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ramp3Q9WUP1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.08■□□□□ 0.97
Ramp3Q9WUP1 Mir3960-201ENSMUST00000198213 73 ntBASIC21.08■□□□□ 0.97
Ramp3Q9WUP1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ramp3Q9WUP1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ramp3Q9WUP1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ramp3Q9WUP1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ramp3Q9WUP1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Ramp3Q9WUP1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ramp3Q9WUP1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ramp3Q9WUP1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ramp3Q9WUP1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.04■□□□□ 0.96
Ramp3Q9WUP1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ramp3Q9WUP1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ramp3Q9WUP1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ramp3Q9WUP1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ramp3Q9WUP1 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.03■□□□□ 0.96
Ramp3Q9WUP1 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.03■□□□□ 0.96
Ramp3Q9WUP1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ramp3Q9WUP1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ramp3Q9WUP1 Amer2-203ENSMUST00000225247 2662 ntBASIC21.02■□□□□ 0.96
Ramp3Q9WUP1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ramp3Q9WUP1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ramp3Q9WUP1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ramp3Q9WUP1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ramp3Q9WUP1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ramp3Q9WUP1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ramp3Q9WUP1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ramp3Q9WUP1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21■□□□□ 0.95
Ramp3Q9WUP1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ramp3Q9WUP1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ramp3Q9WUP1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ramp3Q9WUP1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ramp3Q9WUP1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ramp3Q9WUP1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.98■□□□□ 0.95
Ramp3Q9WUP1 Gm45364-201ENSMUST00000210883 159 ntBASIC20.98■□□□□ 0.95
Ramp3Q9WUP1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ramp3Q9WUP1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ramp3Q9WUP1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ramp3Q9WUP1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ramp3Q9WUP1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms