Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RpgrQ9R0X5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
RpgrQ9R0X5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
RpgrQ9R0X5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RpgrQ9R0X5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RpgrQ9R0X5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RpgrQ9R0X5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.61■■□□□ 1.37
RpgrQ9R0X5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
RpgrQ9R0X5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RpgrQ9R0X5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RpgrQ9R0X5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RpgrQ9R0X5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RpgrQ9R0X5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RpgrQ9R0X5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
RpgrQ9R0X5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RpgrQ9R0X5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
RpgrQ9R0X5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RpgrQ9R0X5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RpgrQ9R0X5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RpgrQ9R0X5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
RpgrQ9R0X5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RpgrQ9R0X5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RpgrQ9R0X5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RpgrQ9R0X5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RpgrQ9R0X5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RpgrQ9R0X5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
RpgrQ9R0X5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RpgrQ9R0X5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
RpgrQ9R0X5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RpgrQ9R0X5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RpgrQ9R0X5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RpgrQ9R0X5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RpgrQ9R0X5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RpgrQ9R0X5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RpgrQ9R0X5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RpgrQ9R0X5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RpgrQ9R0X5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RpgrQ9R0X5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RpgrQ9R0X5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RpgrQ9R0X5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
RpgrQ9R0X5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RpgrQ9R0X5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RpgrQ9R0X5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RpgrQ9R0X5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RpgrQ9R0X5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RpgrQ9R0X5 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.46■■□□□ 1.35
RpgrQ9R0X5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RpgrQ9R0X5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RpgrQ9R0X5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RpgrQ9R0X5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RpgrQ9R0X5 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.45■■□□□ 1.34
RpgrQ9R0X5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RpgrQ9R0X5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RpgrQ9R0X5 Nkain2-201ENSMUST00000092602 558 ntBASIC23.44■■□□□ 1.34
RpgrQ9R0X5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RpgrQ9R0X5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RpgrQ9R0X5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
RpgrQ9R0X5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.43■■□□□ 1.34
RpgrQ9R0X5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RpgrQ9R0X5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RpgrQ9R0X5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RpgrQ9R0X5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RpgrQ9R0X5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RpgrQ9R0X5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.41■■□□□ 1.34
RpgrQ9R0X5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RpgrQ9R0X5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RpgrQ9R0X5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
RpgrQ9R0X5 Gm6821-201ENSMUST00000107540 542 ntBASIC23.39■■□□□ 1.33
RpgrQ9R0X5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.39■■□□□ 1.33
RpgrQ9R0X5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
RpgrQ9R0X5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.37■■□□□ 1.33
RpgrQ9R0X5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RpgrQ9R0X5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RpgrQ9R0X5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RpgrQ9R0X5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RpgrQ9R0X5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.36■■□□□ 1.33
RpgrQ9R0X5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RpgrQ9R0X5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RpgrQ9R0X5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RpgrQ9R0X5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RpgrQ9R0X5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RpgrQ9R0X5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
RpgrQ9R0X5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RpgrQ9R0X5 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.34■■□□□ 1.33
RpgrQ9R0X5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RpgrQ9R0X5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RpgrQ9R0X5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.34■■□□□ 1.33
RpgrQ9R0X5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RpgrQ9R0X5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RpgrQ9R0X5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RpgrQ9R0X5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
RpgrQ9R0X5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RpgrQ9R0X5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RpgrQ9R0X5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
RpgrQ9R0X5 Gm8503-201ENSMUST00000118131 455 ntBASIC23.31■■□□□ 1.32
RpgrQ9R0X5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RpgrQ9R0X5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RpgrQ9R0X5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.29■■□□□ 1.32
RpgrQ9R0X5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.29■■□□□ 1.32
RpgrQ9R0X5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms